AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco7g02158 ATGTCTACAAATATTAACCTATATGGAGCAAATATAACATACCATAGATCATTATACACACATCAGCAGCTGAGTTTTGCTTCATCAGTTGCGTCGTTTCGCGGAACGTGTAGAGTTAGTAGGGATCGGGTTTCGTGTAGGGGGAGTGGGTTTAAGGTGGTTTGTAATGCGCAGAATGTCGCAGTTAGGAGTGAGAATGAAAATATAGCGTTGCAAGGATTGAGTAAAGAGTTATCGTGTGTGATGAAGTTTGGTGGATCGTCTGTCGCGTCTGCGGAGAGGATGAGAGAAGTGGCGGCTCTCATTCTTAGCTTCCCGGAAGAGTGTCCGGTTATTGTTTTGTCTGCTATGGGCAAAACCACCAACAAGATCCTATTGGCTGGAGAGAAGGCTAAGTGCGGTGAATCTGTTGTGGCTGAAATTGATGAATTGAGAGAACTCCACCATAGGACAGTGGATGAGCTTGGATTAGATAGATCAATCATTACATACCACTTAGAAAAATTAGAACGATTAGTGGAAGTAATTGCTGAACTTAAAGAGTTTACACCACGTACAAGGGACTACCTAGTCTCATTTGGGGAGCGCATGTCCACCAGAATTTTTGCAGCATACTTGAATAAACTAGGTGTCAAAGCCCGCCAATACGATGCATTTGAAATTGGGTTCATAACAACAGATGACTTTACTAATGCTGATATTTTGGAAGAAACTTATCCAGCTGTTGCAGAGAGACTAAATGGTGATTGGATTAAGGATCCTGCAATTCCTATTGTCACTGGCTTTCTTGGAAAGGGTAGGAAAACTGGTGATGTGACTACATTGGGCAGAGGTGGCAGTGATTTGACTGCGACCACCATTGGTAAAGCACTTGGATTGCGAGAAATTCAGGTATGGAAAGATGTAGATGGTGTCTTGACATGTGACCCAAATATATACAAGGGTGCAGAACCTGTGCCATATTTGACTTTTGATGAGGCAGCTGAACTTGCATATTTTGGTGCCCAGGTCCTACATCCTCAGTCGATGAGGCCCGCAAGAGAGGGTGACATACCTGTTAGGGTTAAAAATTCTTATAACCCCAATGCTCCTGGTACCCTAATCACTAAATCAAGAGATATGAGTAAGGCAGTACTAACCAGCATTGTTCTGAAACGTAATGTAACTATGTTAGACATTGTTAGCACTCGCATGCTTGGCCAATTCGGATTCCTAGCTAAGGTCTTCTCAATTTTTGAGGACTTGGGTATCTCCGTGGATGTTGTAGCTACTAGTGAAGTTAGCATTTCCCTTACGTTAGATCCTTCAAAGCTGTGGAGCCGGGAGTTGATTCAGCAGGAACTTGATCATGTTGTGGAAGAACTTGAAAAGATTGCTAAAGTCAATCTCCTTCAGCACAGATCAATTATTTCACTCATTGGGAATGTTCAGAGGTCCTCACTTGTATTGGAAAAGGCATTTCATGTTCTTCGTGTGAATGGAGTGAATGTTCAGATGATATCACAAGGAGCATCGAAGGTGAATATATCACTTATAGTAAATGACGCTGAATCAGAAAAATGTGTGAGAGCCCTGCATTCGGCGTTCTTCGAGGATGATATGTCTGACATTAACTGA 1617 42.42 MSTNINLYGANITYHRSLYTHQQLSFASSVASFRGTCRVSRDRVSCRGSGFKVVCNAQNVAVRSENENIALQGLSKELSCVMKFGGSSVASAERMREVAALILSFPEECPVIVLSAMGKTTNKILLAGEKAKCGESVVAEIDELRELHHRTVDELGLDRSIITYHLEKLERLVEVIAELKEFTPRTRDYLVSFGERMSTRIFAAYLNKLGVKARQYDAFEIGFITTDDFTNADILEETYPAVAERLNGDWIKDPAIPIVTGFLGKGRKTGDVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIYKGAEPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITKSRDMSKAVLTSIVLKRNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKLWSRELIQQELDHVVEELEKIAKVNLLQHRSIISLIGNVQRSSLVLEKAFHVLRVNGVNVQMISQGASKVNISLIVNDAESEKCVRALHSAFFEDDMSDIN 538
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco7g02158 538 Gene3D - 81 368 IPR036393 -
Glco7g02158 538 FunFam Aspartokinase 389 460 - -
Glco7g02158 538 SUPERFAMILY Carbamate kinase-like 81 371 IPR036393 -
Glco7g02158 538 Pfam ACT domain 470 529 IPR054352 -
Glco7g02158 538 Gene3D - 380 530 - -
Glco7g02158 538 NCBIfam aspartate kinase 81 531 IPR001341 GO:0004072(InterPro)|GO:0008652(InterPro)
Glco7g02158 538 Gene3D Aspartokinase, catalytic domain 118 210 IPR042199 -
Glco7g02158 538 SUPERFAMILY ACT-like 458 533 IPR045865 -
Glco7g02158 538 FunFam Aspartokinase 118 210 - -
Glco7g02158 538 CDD ACT-AK1-AT-1 388 465 IPR047896 -
Glco7g02158 538 Pfam Amino acid kinase family 80 357 IPR001048 -
Glco7g02158 538 SUPERFAMILY ACT-like 377 475 IPR045865 -
Glco7g02158 538 ProSitePatterns Aspartokinase signature. 81 89 IPR018042 GO:0004072(InterPro)|GO:0008652(InterPro)
Glco7g02158 538 PANTHER ASPARTATE KINASE 78 531 - GO:0004072(PANTHER)|GO:0005829(PANTHER)|GO:0009089(PANTHER)|GO:0009090(PANTHER)|GO:0009570(PANTHER)
Glco7g02158 538 FunFam Aspartokinase 1 461 530 - -
Glco7g02158 538 Gene3D - 389 464 - -
Glco7g02158 538 FunFam Aspartokinase 181 368 - -
Glco7g02158 538 ProSiteProfiles ACT domain profile. 393 466 IPR002912 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco7g02158 K00928 aspartate kinase [EC:2.7.2.4]
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Event-related genes

Select Gene_1 Gene_2 Event_name
100382 Glco7g02158 Glco8g02442
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr7:350450184 Glco8g02442 Glco-Chr8:132390848 wgd