AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco7g02172 ATGGCGGCGGATCAGCTGAATAAGCGTAAAGTAAGCAACGTGACCCATCAAACTTCTTTAGAGCCGCAGAAAACGAAGAAGACGAAATTATCTCATTATGATTTAAATACAGCATCGAATATTTCTCTCGAGTGGGATGACAAGAAGAAACATGTTGTTTCTAAGAAGGAGCAGATAAGTATTGCACGTAGAGAGTTGACACCGTTTCTTCCTTGTGTTCCACATCGCCAGAATGTCTTGGGTGATGTCGTTGCAGCTCCTTCTGAGTTATTTGAACTGGATGACTTGACTGATTTGCTGTCATTTGAGGTTTGGCAAACTCAATTGTCTGTACAAGAAAGAGAGTTTCTGACCCAGTTTCTTCCGGAAGGAGCTGACTCGCATACTGTTGTGGATGACTTGTTATCTGGGAGGAATTTTTTCTTCGGAAGTCCATTCCAAAAATGGGGTACTTCAGTTTGTTCCGGTGATTGTCACCCTGATGCTGTTCTTCGTCAAGAAGAGTGTAACAAGGCTAACAAAATAGCATATTATAAGGAATTGCAAGAGTACCATACCAAAATGATAGGGAGTCTGCAATTGTGGAAGGAAACATGGGCATGCTGTCTGAATCCGGAAAATGACTTTAGCCAACAGATAAGCAGGCCCCTGAATAAATATGACAAAAATGGCTCCTCACAACAGAAACACGTACATGGTAGTCCTGAAGATGGTGTGGGTGCAACATCTGATTCTGGCTATTTCGATGCTGAAGATAAGCCATATAGTAGCAATAGCCCGGATGTAGCAATCATGAATGGAGAAACTTCAACAAGGGTCACGAAAATGGAACCAGGGAATTATTATTTTGACTCTTCAGTTAGATCGAAATCGGTAGCAATCATGAATGGAGAAACTTCAACAAGGGTCACGAAAATGGAACCAGGGAACTATTATTTTGACTCTTCAGTTGGATCGAAATCGGTAGCAAGATCTAGAAAAGGAGATAATTTACGCAGGCCCAGTGTAGAGTGTGGTGATGGTGCCAAATATATGTCATGTATCAAGGTTAGCAAAGTTCAGCATGAACGAGTTAAAAGCAGTATGAAACACTCTAACACCAGCATCCAATGGAAGTCTCTCAATCATGTTTTTGGCAATCATGATAGTATCTGTGTTGTACCATATGAAGTGTTTGAAGAAGAAGAGAGACTGAAGCTGCACGAACACTGGTCTCAGTTGGCAAAGAAAGATCTCCCTGCAGGCTTTGCAAATTGGAATAGTTGGCGATCTGCCAGGTGGCAGTTAGGAATATCGTTAAGGAAAGAAATGGAAGATAAAGTGAAGTCAAATGATCAATCAGTTTCAAATTTTTGTAATCAGGACGAGGAGTCAAAATATGGTGATGTTCAGGACATGGAACAAGAACAAAACGCCGATTCAGTGCTCCATTCTGAGGCGGATGTAAATGCAGAAAACCATGAAACAGCAATGGAAATTGAACCAAATGATCAGCTTAATCAATGCTCGCGTCGGAATCAGCATCTACCACAGATTAATGTAATACATAATGATAGCCAAAACTTCTGCTCCATGCCCATGGTGGCTGCCAATGATGATGTATTGATCCACTCAAGTGCTTTTCCTTCTAGTACAACAACAGCATACCCAATCCAGACGGAGAGAGGTACGGGTGCTTTTCCTTCTAGTCTAGGTGAATATCCCGTCAGTATTAACAGTGCAGATGCATCAGTTGGTGAAGATATATGGCCTGAAGTTAGCTTACCACAAAGTGTGTACTATCACCATCCGACATCTGTAAGTTTAAGTGATGGATACGCTTCTGTTGGTGATTTGCCACTAGGCCATTCGAGCCAACCGATTGTTCTAGAATCCGAGATACTACAAAAGGATCCTCTTAGAAGTTTTATGCACAAAGGACCTGATGGTGGTGATTTTTTCTGTAATCCATATGCTAATCAAGACCGTAACGAATTACTACTCCAATCACTTTATAAAGATCCTGGAAATTCTGATTATCTTCATGCACAGAAGCTTTCTGGTTTATCTTTCCACTCAACTGTGAGTGACCCGATGCTTGGAACCAATCAGTTTTCTAGAAATTTGTGCCCATCGATGCCAATGGATCCTGCGCTTCTGAGTATTCAAGAAAACTTATATTCAATTCCAAGGCAAGAACACTTGTTGCCAATGAATAACCTTCACGATTGGCCTGGAAATGGCGGTATTAACCTTCCCGTGACATCGTCATCCCATCCTCGGTTAAATCAAAATTGGTATCATGCTGATGAGGTGGTGCACAATGGGTGGTCTGGCGGTGTATTACCGAAACAGGACCTTCTGAATGGTGTTCAGGTAATTGATGAGAGCCTATTTAGCGTTTTAGCTCAGCATAATGGGGCCCATATTGGTTCAACCGGTGCAATGCAACAGTTTATTCCATCTGGGAACTATGTCGGGGTTGGAGCTGGGCTTGGTGCAGTTGCACCTACATTTCCTGCTGTACCTCCTCGTACCATTACAGGGTCAGGTTTTAACTACATGAGTGGCAATGAAGCTCAGTTAGGATGGATGAACTTGCCACATGCATTGCAGGGGATGGGTAAATCGTTTCCAAGACTTTGGTATGATAAAGATATAGGACGGTGA 2649 42.2 MAADQLNKRKVSNVTHQTSLEPQKTKKTKLSHYDLNTASNISLEWDDKKKHVVSKKEQISIARRELTPFLPCVPHRQNVLGDVVAAPSELFELDDLTDLLSFEVWQTQLSVQEREFLTQFLPEGADSHTVVDDLLSGRNFFFGSPFQKWGTSVCSGDCHPDAVLRQEECNKANKIAYYKELQEYHTKMIGSLQLWKETWACCLNPENDFSQQISRPLNKYDKNGSSQQKHVHGSPEDGVGATSDSGYFDAEDKPYSSNSPDVAIMNGETSTRVTKMEPGNYYFDSSVRSKSVAIMNGETSTRVTKMEPGNYYFDSSVGSKSVARSRKGDNLRRPSVECGDGAKYMSCIKVSKVQHERVKSSMKHSNTSIQWKSLNHVFGNHDSICVVPYEVFEEEERLKLHEHWSQLAKKDLPAGFANWNSWRSARWQLGISLRKEMEDKVKSNDQSVSNFCNQDEESKYGDVQDMEQEQNADSVLHSEADVNAENHETAMEIEPNDQLNQCSRRNQHLPQINVIHNDSQNFCSMPMVAANDDVLIHSSAFPSSTTTAYPIQTERGTGAFPSSLGEYPVSINSADASVGEDIWPEVSLPQSVYYHHPTSVSLSDGYASVGDLPLGHSSQPIVLESEILQKDPLRSFMHKGPDGGDFFCNPYANQDRNELLLQSLYKDPGNSDYLHAQKLSGLSFHSTVSDPMLGTNQFSRNLCPSMPMDPALLSIQENLYSIPRQEHLLPMNNLHDWPGNGGINLPVTSSSHPRLNQNWYHADEVVHNGWSGGVLPKQDLLNGVQVIDESLFSVLAQHNGAHIGSTGAMQQFIPSGNYVGVGAGLGAVAPTFPAVPPRTITGSGFNYMSGNEAQLGWMNLPHALQGMGKSFPRLWYDKDIGR 882
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco7g02172 882 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 87 198 IPR044867 -
Glco7g02172 882 MobiDBLite consensus disorder prediction 216 232 - -
Glco7g02172 882 MobiDBLite consensus disorder prediction 216 246 - -
Glco7g02172 882 PANTHER NFRKB-RELATED 1 492 IPR024867 GO:0031011(InterPro)
Glco7g02172 882 MobiDBLite consensus disorder prediction 1 27 - -
Glco7g02172 882 CDD DEUBAD-NFRKB 89 195 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco7g02172 - -