AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco7g02173 ATGGCTACTGGTATAAAATATAATCACGACAGGGAAATCATTCGATTAGAACGTGAAGCCGTTATTCCAATTTTGAAGCCTAGGCTAATCATGACATTGGCCAACCTCATTGAGCACACTGCTGACCGCGGAGAGTTCTTGAAACTATGCAAAAGAGTCGAGTACACGATTCGAGCATGGTATCTTCTTCAGTTTGAAGATCTTATGCAACTATATGCACTTTTTGACCCTGTCTATGGTGCTCAAAAATTGGCGCAGCAGAAGTTATCGCCACAAGAAGTCGATGTTCTTGAACAGAATTTCCTTAACTACATGTTTAAGGTACTTGAAAAGAGTAATTTTAAGATTGCAACAAATGAGGAAATCGCCGTTGCACAATCAGGACAATATCTTCTAAATCTTCCTATCTCCGTGGATGAATCAAAACTTGATAAAAGTTTATTAACAAGATACTTTAAGGAACATCCTCAAGAAAACCTTCCTGACTTTGCAGATAAGTATATAATTTTTAGACGTGGCATTGGAATTGATCGGACTACTGATTACTTTATCATGGAGAAGATCGACATGATCATTGCACGTATATGGTCATGGATCATGAGAGTAACTAGGATAGAAAAGTTTTTTCCAAAAACTTCAAGCCCCCTAATCAAGAAAGATACAACGAAAAAAGATGAAATCACGGATGAAGAGTTAGAAGATGAGCTGTATGTTGAGCGGATCCGAATAGAAAACTTAGATCTGAGTATAGAGAAGTTGGCAAATAAAATAACAATACAAGAACCTACGTTCGACAGGATAATTGTCGTTTACAGGCTAGCAGGCACCAAGACGAAAAAGGAAAGGGGAATCTATGTGAAGCACCTAAAACAAATTCCTATGGCGGACATGGAAATAGTTCTCCCAGAGAAGAAAAGTCCAAGTTTAACCCCTATGGATTGGTTGAAATTCCTTTCTACTGCTATTTTCGGGCTGGCAGCTGTGACTGGTTCAATTGAAACGCCTAAAGCTGACTTTTGGGTCATTGTTGCCATTGTCTCAACGGTAGTTGGTTACTTCGCCAAAGTATACTTTACGTTTCAGGCAAACATGGAAACTTATCAGAACTTAATTACACAATTCATGTATGATAAACAGCTCGATAGTGGAAAAGGAACTCTTCTTCACTTGTGTGATGATGTCATTCAACAAGAAGTAAAAGAGGTGATCATTTCTTTTTTCATATTGATGGAACAAGGAAAAGCAACTTTAAAGGAACTAGACCAAAAATGTGAAGAACTGCTAAGAGAAGAGTTTGGCGAAAGATGCAACTTTGATGTGGATGATGCGGTCAACAAATTGGAAAAACTGGGGATTATCGCAAAGGATCAAATAGGAAGGTATTACACTACCGGTCTTAAACGTGCAAATGAGATTATTGGCACCACTACAGAAGAGCTGGTACTTAAGGCAAGACAGGAGGGCGGTCCTTAA 1473 38.63 MATGIKYNHDREIIRLEREAVIPILKPRLIMTLANLIEHTADRGEFLKLCKRVEYTIRAWYLLQFEDLMQLYALFDPVYGAQKLAQQKLSPQEVDVLEQNFLNYMFKVLEKSNFKIATNEEIAVAQSGQYLLNLPISVDESKLDKSLLTRYFKEHPQENLPDFADKYIIFRRGIGIDRTTDYFIMEKIDMIIARIWSWIMRVTRIEKFFPKTSSPLIKKDTTKKDEITDEELEDELYVERIRIENLDLSIEKLANKITIQEPTFDRIIVVYRLAGTKTKKERGIYVKHLKQIPMADMEIVLPEKKSPSLTPMDWLKFLSTAIFGLAAVTGSIETPKADFWVIVAIVSTVVGYFAKVYFTFQANMETYQNLITQFMYDKQLDSGKGTLLHLCDDVIQQEVKEVIISFFILMEQGKATLKELDQKCEELLREEFGERCNFDVDDAVNKLEKLGIIAKDQIGRYYTTGLKRANEIIGTTTEELVLKARQEGGP 490
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco7g02173 490 PANTHER AMINOPEPTIDASE (DUF3754) 9 487 - -
Glco7g02173 490 Pfam Protein of unknown function (DUF3754) 264 385 IPR022227 -
Glco7g02173 490 Coils Coil 410 430 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco7g02173 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
100383 Glco7g02173 Glco8g02446
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr7:35630456 Glco7g02173 Glco-Chr7:351098641 dispersed
Glco Glco-Chr7:351098641 Glco8g02446 Glco-Chr8:132669051 wgd