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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g00869 ATGACGTCAGGAACGAGGATGCCGACGTGGAAGGAGCGAGAGAACAACAAGAGGAGAGAGAGGAGGAGGAGAGCCATCGCTGCGAAGATATTCACCGGTTTGAGGATGTACGGTAACTACAAGCTGCCGAAACATTGTGATAATAATGAAGTACTCAAAGCACTCGCTGATGAGGCCGGTTGGACCGTTGAACCGGACGGAACTACGTATCGTAAGGGATGCAAGCCTATAGAGCGGATGGAAATTGGTGGATCAGCATCAGTAAGCCCATGTTCATCTTACCAGCCCAGCCCATATGCTTCCTATCACCCAAGCCCACCGTCATCTTCAATTGCAAGCCCATCCTCATCCTCTTACGTACCCAACACCCACCCAGATTCACTCATCCCATGGCTCAAGAACCTTTCTTCTTCATCCTCATCATCACACTCAGCCAAACTTCCCCATCTTTACATCCACACCGGGTCCATTAGCGCGCCCGTGACCCCACCCATGAGCTCCCCAACAGCTCGATCACCTACCCGAATCAAAACCAACACTCTTTGGGGAGCACCCGCTCCCGAATGGTTAACTGGCATTCGTCCCACGTCTCCAACTTTCAGCCTTGTGGCAGCGAACCCGTTTGGGTTCAAGGATACGGGCTTGTCTCATGGTGGCTCGCGAATGTGGACACCTGGTCAAAGTGGGACGTGTTCTCCTGCAATTCCTGCGGGCTTTGATAACAACGCGGATATTCCAATGGCGGAAGTGGTTACCGATGACTTTGCATTCGGTAAAGTGAAGCCGTGGGAAGGAGAAAGAATTCACGAGGTTTGCGGGTCTGATGATCTTGAGCTTACTCTTGGAAATTCAAAAACTAGGTAA 864 51.27 MTSGTRMPTWKERENNKRRERRRRAIAAKIFTGLRMYGNYKLPKHCDNNEVLKALADEAGWTVEPDGTTYRKGCKPIERMEIGGSASVSPCSSYQPSPYASYHPSPPSSSIASPSSSSYVPNTHPDSLIPWLKNLSSSSSSSHSAKLPHLYIHTGSISAPVTPPMSSPTARSPTRIKTNTLWGAPAPEWLTGIRPTSPTFSLVAANPFGFKDTGLSHGGSRMWTPGQSGTCSPAIPAGFDNNADIPMAEVVTDDFAFGKVKPWEGERIHEVCGSDDLELTLGNSKTR 287
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g00869 287 MobiDBLite consensus disorder prediction 1 21 - -
Hean11g00869 287 Pfam BES1-BZR1 plant transcription factor, N-terminal 4 136 IPR008540 -
Hean11g00869 287 MobiDBLite consensus disorder prediction 96 119 - -
Hean11g00869 287 PANTHER BES1-BZR1 HOMOLOG PROTEIN 3-RELATED 1 287 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g00869 K14503 brassinosteroid resistant 1/2
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Event-related genes

Select Gene_1 Gene_2 Event_name
101060 Hean11g00869 Hean13g00349
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:20431228 Hean3g02291 Hean-Chr3:125541091 dispersed
Hean Hean-Chr11:20431228 Hean16g03015 Hean-Chr16:150739002 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hean16g00320 . 52 82 BZR Transcription Factor family AT4G36780 61.29 1.51e-07 45.4
Hean16g01157 WGDA 21 334 BZR Transcription Factor family AT1G19350 60.759 4.41e-94 280.0
Hean16g01682 . 41 88 BZR Transcription Factor family AT1G19350 60.417 2.54e-15 68.6
Hean16g03015 ACH 1 325 BZR Transcription Factor family AT1G78700 65.549 3.37e-115 334.0
Hean15g02206 ACH,WGDA 1 325 BZR Transcription Factor family AT1G78700 67.073 7.89e-116 335.0
Hean14g01817 . 23 334 BZR Transcription Factor family AT1G75080 63.462 4.57e-110 321.0
Hean13g00349 ACH,WGDA 1 325 BZR Transcription Factor family AT1G78700 60.671 8.83e-100 295.0
Hean11g00869 ACH 1 325 BZR Transcription Factor family AT1G78700 66.159 7.42e-111 322.0
Hean9g03805 ACH,WGDA 22 335 BZR Transcription Factor family AT1G75080 61.199 1.38e-94 281.0
Hean8g03448 . 22 335 BZR Transcription Factor family AT1G75080 50.789 7.94e-77 236.0
Hean6g01999 . 41 88 BZR Transcription Factor family AT1G19350 60.417 1.26e-15 69.7
Hean4g01356 ACH 21 329 BZR Transcription Factor family AT1G19350 50.159 3.08e-68 213.0
Hean4g02993 ACH,WGDA 1 325 BZR Transcription Factor family AT1G78700 69.512 6.53e-122 351.0
Hean3g02291 WGDA 3 325 BZR Transcription Factor family AT1G78700 65.432 1.95e-108 318.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Hean BES1_N 9.3e-63 No_clan TF BES1