AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean11g00900 | ATGGCTTCAAATTTCTTTCTTCTTTTGCTCTCCTTTCAACTGTTTTCCTCTCTTTCTGAAGCTGTTGTGCCTGCTTCAGAAACATTCACTTACGTTAACCAAGGTGATTTTGGCGAATACATTGTTGAATATGATGCGAATTATCGTGCGCTTTCCCAATTTACCAACCCATTCCAACTTTGCTTCTACAACACAACCTCTAACGCATTTACTATAGCTCTCCGTATGGGTACGGTTCGATCCGAATCCGTCATGCGTTGGGTTTGGGAAGCCAACCGTGGAAACCCGGTTCGCGAAAACGCCACCCTCACATTCGGTACAGACGGCAACCTAGTCCTGGCGGATGCTGACGGACGGGTTGTCTGGCAAACGAACACCGCGAACAAGGGTGTGGTCGGGTTTCAACTGCTTCCAACCGGTAACATGGTTCTTCACGACGGTAAGGGTAATTACTTATGGCAAAGCTTTGATTCCCCAACCGACACTCTCTTGGTGGGTCAAACACTACGACCTGGTGGTCCGAATAAGCTTGTGAGTAGGCTATCGGAGGTGAGCAACGTCGATGGACCGTACAGTTTGGTTTTGGAGCCCAAAGGGTTAGCCTTCTATTACAAAAGTCCCAACTCGCCTCGACCAATGCTTTACCGGTCATGGTTCATCACTGGCCAAAGTAGTTTAACCAATTTAACTTTTAATTCGGTCGAATACACGGAATTTTTATATTACTTGACGTTAGAATTCTTTACCACAGACCCTACATCATGGTTGAGTCGCAACAAAATGGCGCATTCGGGATACAACAACACGTTATCGTATCTTCGATTAGGGATAGATGGGAACGTTAGATTCTACACGTATAATCCGAATGTGCAAGAAGGTGTAGCATGGGAGTTGGTGTTCACGTTTCTCGATCGGAACTTTGTGGCAGGTGAGTGTCAGTTACCGGGACGATGTGGGAACTTTGGGTTATGTGAGGACAGCCAGTGTGTGGCGTGCCCGACACCAAACGGGCTAATCGGGTGGAGTAAAGAGTGCGAGGTGAAAAAAGTGACATCTTGCAAAGCTAGCGACTTTGGGTACTACAAGCTTCAAGGGGTAGACCATTTTACGATCAAGTACACGAGGGGAGATGAGACTAAACAAAGCGATTGTGAGAGCAAATGCACAAAGGATTGCAAGTGCATGGGGTACTTCTATCACACGGATAGTTCAAGATGCTGGATTGCTTACGATTTGAAGACATTGACAAGAGTTGGGAACTCGACTCATTTGGCGTACATCAAAACACCCAACAAGTAG | 1299 | 46.42 | MASNFFLLLLSFQLFSSLSEAVVPASETFTYVNQGDFGEYIVEYDANYRALSQFTNPFQLCFYNTTSNAFTIALRMGTVRSESVMRWVWEANRGNPVRENATLTFGTDGNLVLADADGRVVWQTNTANKGVVGFQLLPTGNMVLHDGKGNYLWQSFDSPTDTLLVGQTLRPGGPNKLVSRLSEVSNVDGPYSLVLEPKGLAFYYKSPNSPRPMLYRSWFITGQSSLTNLTFNSVEYTEFLYYLTLEFFTTDPTSWLSRNKMAHSGYNNTLSYLRLGIDGNVRFYTYNPNVQEGVAWELVFTFLDRNFVAGECQLPGRCGNFGLCEDSQCVACPTPNGLIGWSKECEVKKVTSCKASDFGYYKLQGVDHFTIKYTRGDETKQSDCESKCTKDCKCMGYFYHTDSSRCWIAYDLKTLTRVGNSTHLAYIKTPNK | 432 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean11g00900 | 432 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 67 | 206 | IPR036426 | - | |
| Hean11g00900 | 432 | Gene3D | - | 25 | 158 | IPR036426 | - | |
| Hean11g00900 | 432 | SMART | blect-4 | 42 | 159 | IPR001480 | - | |
| Hean11g00900 | 432 | CDD | B-lectin | 42 | 159 | IPR001480 | - | |
| Hean11g00900 | 432 | ProSiteProfiles | PAN-Apple domain profile. | 353 | 430 | IPR003609 | - | |
| Hean11g00900 | 432 | ProSiteProfiles | Bulb-type lectin domain profile. | 26 | 157 | IPR001480 | - | |
| Hean11g00900 | 432 | Pfam | D-mannose binding lectin | 88 | 169 | IPR001480 | - | |
| Hean11g00900 | 432 | CDD | PAN-AP-plant | 352 | 430 | - | - | |
| Hean11g00900 | 432 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 49 | 430 | IPR051343 | - | |
| Hean11g00900 | 432 | FunFam | Os04g0303100 protein | 78 | 212 | - | - | |
| Hean11g00900 | 432 | PIRSF | SLG | 1 | 432 | IPR035446 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean11g00900 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr11:21509865 | Hean11g00908 | Hean-Chr11:21595944 | dispersed | |
| Hean | Hean-Chr11:21509865 | Hean11g00904 | Hean-Chr11:21537807 | proximal |