Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean11g00913 | ATGGCGAATCGGAATTTGGAGAAATTGGCATCGATCGACGCTCAGTTGAGGCTTTTGGTTCCCGGAAAAGTTTCAGAGGATGATAAGCTTATTGAGTATGATGCGTTGCTGTTGGATAAGTTTCTAGATATTCTTCAGGATTTACATGGAGAAGATCTTAAGGAAACGGTTCAAGAATGCTATGAGCTTTCTGCTGAATACGAGGGAAAGCGTGACCCGAAGAAGCTCGAGGAGCTCGGAAGTGTGTTGACCAGTTTAGATCCAGGGGATTCGATTGTCATTGCAAAAGCTTTCTCTCACATGCTTAATTTAGCCAATCTGGCTGAAGAGGTTCAGATCGCTTTCCGTAGAAGGATCAAGCTGAAAAAGGGTGATTTTGCCGATGAGGCTAATGCGACAACCGAATCGGATATTGAAGAAACTCTTAAGAAGCTTGTGTATAAGCTTAACAAGTCCCCTGAAGAGGTTTTTGATGCACTCAAAAATCAAACTGTTGACTTGGTGTTGACCGCTCATCCGACTCAATCGGTCCGCAGATCTTTACTTCAGAAGCATGGAAGGATCCGTAACTGTCTGGCCCAGTTATATGCTAAAGACATCACTCCCGATGACAAGCAAGAACTCGATGAGGCCTTACATCGCGAAATCCAAGCTGCTTTCCGTACCGATGAGATCAGAAGGACCCAACCGACACCGCAAGATGAAATGCGAGCTGGAATGAGTTACTTTCATGAAACAATATGGAAGGGTGTTCCGAAGTTCTTACGGCGTGTCGACACCGCTCTAAAGAATATCGGGATTAATGAACGTGTTCCGTATAATGCACCTCTTATTCAGTTTTCTTCATGGATGGGTGGTGACCGTGACGGTAATCCAAGAGTGACTCCTGAGGTAACAAGGGATGTTTGCTTACTAGCAAGAATGATGGCTGCAAACATGTACTTTTCGCAGATCGAGGATCTAATGTTTGAGATGTCCATGTGGCGTTGTACCGATGAACTACGCGTTCGAGCTGAAGACCTCTTTCGAACAGCAAGGAGAGATGTAAAGCACTACATAGAGTTCTGGAAACAGGTTCCTCCCACTGAACCTTATCGTGTAATTCTCGGTGATGTAAGGGATAAGTTATATAATACACGTGAACGTGCTCGCCATTTGTTAGCGCATGATATATCCGACATTCCAGAAGAGGCGGTTTACACCAATGTTGAACAGTTCCTAGAACCCCTGGAGCTATGTTACCGATCACTATGTGCGTGCGGTGACCGTGTGATTGCTGACGGAAGCCTTCTAGATTTTCTACGACAGGTGTCGACATTCGGGCTGTCACTAGTGAAACTCGATATACGACAAGAATCCGATCGCCACACAGACGTCCTCGACGCAATCACTCAACATCTGGAAATCGGGTCCTACCGTGAATGGTCTGAAGAAAAACGTCAAGAATGGCTTCTAGCTGAACTCAGGGGAAAACGTCCGCTTTTCGGTTCCGATCTCCCGAAAACCGAGGAAATTAAGGATGTTTTGGACACGTTCGGTGTGTTGGCAGAACTCCCGGCTGATTGTTTCGGTGCTTATATCATCTCAATGGCCACGTCACCGTCTGACGTCCTCGCTGTCGAGCTTCTTCAACGCGAATGCCACGTAAAACAACCGTTACGCGTGGTCCCGCTTTTTGAAAAACTTGCTGATCTGGAAGCTGCCCCTGCCGCTATGGCCCGTCTTTTCTCAGTCGATTGGTACAAAAACCGAATTAACGGGAAACAAGAAGTCATGATCGGGTACTCCGATTCCGGAAAAGACGCTGGGCGGTTTTCTGCTGCGTGGCAGCTTTACAAAGCTCAAGAAGAGCTGAAAAACGTTGCAAAAGAGTTTGGAGTTAAACTTGTTATGTTTCACGGGCGTGGTGGGACCGTGGGCCGAGGTGGTGGGCCCACCCATCTTGCTATCCTGTCCCAACCTGCTGAGACCATTCAGGGGTCGTTAAGAGTCACAGTTCAGGGGGAGGTTATTGAGCAATCGTTTGGTGAGGAACATTTGTGTTTTAGAACGCTGCAACGATTCTGTGCAGCTACACTTGAGCACGGAATGAACCCGCCGATCTCACCGAGGCCCGAGTGGCGTGAACTTATGGACCAGATGGCGGTTGTTGCAACCGAACAGTATCGTTCTATTGTGTTCCAGGAACCACGTTTTGTCGAGTATTTCCGCCTTGCCACACCAGAAATGGAGTACGGGCGTATGAATATCGGAAGTCGCCCATCAAAACGAAAACCGAGTGGCGGCATAGAATCACTTCGAGCCATTCCATGGATCTTTGCATGGACCCAAACCAGGTTCCATCTCCCTGTTTGGCTCGGGTTCGGTGCTGCATTCAAACAAGTCATTCAAAAAGACAGCAAGAATCTTCAAATGCTTCAAGAAATGTACAAAAAATGGCCTTTCTTTCGGGTCACCATCGATTTAGTTGAAATGGTGTTTGCTAAAGGAGACCCCGGCATTGCTGCCTTGAACGACAAGCTACTTGTTTCTGAAGACTTATGGCCCTTTGGAGAATCGTTAAGAGCTAACTATGAAGAAACCAAAGATTATCTCCTCAAGATTGCTGGACACAAGGACCTGCTCGAGGGCGATCCCTACTTGAAACAAAGACTTAAGTTGCGTGATTCATACATCACAACCTTAAACGTTTGTCAAGCGTATACTCTAAAACGGACCCGTGACCCGAATTATCATGTGACCTTAAGGCCGCATATTTCGAAAGAATATGCTGAGCCAAGCAAACCGGCTGATGAACTTATCCACTTGAACCCAACCAGTGAGTATGCCCCGGGTCTGGAGGACACACTCATCTTGACCATGAAGGGTATTGCTGCTGGAATGCAGAACACCGGTTAA | 2898 | 47.0 | MANRNLEKLASIDAQLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEDLKETVQECYELSAEYEGKRDPKKLEELGSVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAFRRRIKLKKGDFADEANATTESDIEETLKKLVYKLNKSPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLAQLYAKDITPDDKQELDEALHREIQAAFRTDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSQIEDLMFEMSMWRCTDELRVRAEDLFRTARRDVKHYIEFWKQVPPTEPYRVILGDVRDKLYNTRERARHLLAHDISDIPEEAVYTNVEQFLEPLELCYRSLCACGDRVIADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVLDAITQHLEIGSYREWSEEKRQEWLLAELRGKRPLFGSDLPKTEEIKDVLDTFGVLAELPADCFGAYIISMATSPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAAMARLFSVDWYKNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELKNVAKEFGVKLVMFHGRGGTVGRGGGPTHLAILSQPAETIQGSLRVTVQGEVIEQSFGEEHLCFRTLQRFCAATLEHGMNPPISPRPEWRELMDQMAVVATEQYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKQVIQKDSKNLQMLQEMYKKWPFFRVTIDLVEMVFAKGDPGIAALNDKLLVSEDLWPFGESLRANYEETKDYLLKIAGHKDLLEGDPYLKQRLKLRDSYITTLNVCQAYTLKRTRDPNYHVTLRPHISKEYAEPSKPADELIHLNPTSEYAPGLEDTLILTMKGIAAGMQNTG | 965 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean11g00913 | 965 | Hamap | Phosphoenolpyruvate carboxylase [ppc]. | 23 | 965 | IPR022805 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hean11g00913 | 965 | FunFam | Phosphoenolpyruvate carboxylase 1 | 308 | 443 | - | - | |
| Hean11g00913 | 965 | Pfam | Phosphoenolpyruvate carboxylase | 34 | 965 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hean11g00913 | 965 | SUPERFAMILY | Phosphoenolpyruvate-pyruvate domain | 33 | 965 | IPR015813 | GO:0003824(InterPro) | |
| Hean11g00913 | 965 | ProSitePatterns | Phosphoenolpyruvate carboxylase active site 2. | 591 | 603 | IPR033129 | - | |
| Hean11g00913 | 965 | Gene3D | Phosphoenolpyruvate-pyruvate domain | 308 | 443 | - | - | |
| Hean11g00913 | 965 | PANTHER | PHOSPHOENOLPYRUVATE CARBOXYLASE | 27 | 965 | IPR021135 | GO:0005829(PANTHER)|GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0008964(PANTHER)|GO:0009507(PANTHER)|GO:0015977(InterPro)|GO:0048046(PANTHER)|GO:0048366(PANTHER) | |
| Hean11g00913 | 965 | PRINTS | Phosphoenolpyruvate carboxylase signature | 589 | 609 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hean11g00913 | 965 | PRINTS | Phosphoenolpyruvate carboxylase signature | 440 | 460 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hean11g00913 | 965 | PRINTS | Phosphoenolpyruvate carboxylase signature | 631 | 660 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hean11g00913 | 965 | PRINTS | Phosphoenolpyruvate carboxylase signature | 167 | 180 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hean11g00913 | 965 | PRINTS | Phosphoenolpyruvate carboxylase signature | 220 | 236 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hean11g00913 | 965 | PRINTS | Phosphoenolpyruvate carboxylase signature | 280 | 295 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hean11g00913 | 965 | PRINTS | Phosphoenolpyruvate carboxylase signature | 763 | 789 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hean11g00913 | 965 | ProSitePatterns | Phosphoenolpyruvate carboxylase active site 1. | 168 | 179 | IPR018129 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean11g00913 | K01595 | phosphoenolpyruvate carboxylase [EC:4.1.1.31] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 100836 | Hean10g02673 | Hean11g00913 | |
| 101063 | Hean11g00913 | Hean13g00302 | |
| 402161 | Hean11g00913 | Hean15g03958 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr11:22022902 | Hean8g00640 | Hean-Chr8:13554575 | dispersed | |
| Hean | Hean-Chr17:120846077 | Hean11g00913 | Hean-Chr11:22022902 | transposed | |
| Hean | Hean-Chr1:16657474 | Hean11g00913 | Hean-Chr11:22022902 | transposed | |
| Hean | Hean-Chr5:101748105 | Hean11g00913 | Hean-Chr11:22022902 | transposed | |
| Hean | Hean-Chr10:144458148 | Hean11g00913 | Hean-Chr11:22022902 | wgd | |
| Hean | Hean-Chr11:22022902 | Hean13g00302 | Hean-Chr13:10616976 | wgd | |
| Hean | Hean-Chr11:22022902 | Hean15g03958 | Hean-Chr15:152392513 | wgd | |
| Hean | Hean-Chr11:22022902 | Hean3g02321 | Hean-Chr3:127227805 | wgd |