Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean11g00918 | ATGGCCGATGAGAAAGAAGAGAAGAAGAACAAGAAGAGCAAAAGCAAGAAATGGGGTTTTCTCTCTCGAATTTGGAACGCATTGTTTGGATTACGTGGTGATGATTTTGAGAAGAGGCTGCAGTATATTTCTAAAGAAGAAGCTACTCTTATTTCTAGGATGAAAAGAAGATCTTTTAGATGGAGAACAACTGCTAGAAATTTAATCATCTTTTCTGTTCTTCTTGAGATGGTTGCAGTGGGTTATGCTATAATGACAACAAGAACAGTGGATATGGATTGGAGAACGAGATCGTTACGGGTTCTACCTATGTTTCTTTTGCCTGCTTTGTCGTTCGGTTTGTATTATGGGCTTTCGAGTTTCACTAAATTTTGTGATCGAAGGGATCAGAAGACGTTAGATGGGCTTCGAGAAGAAAGGCAAGCAAAAATCGACGAGCTTAAAGAGAGAACTAATTATTACATCACTCAGCAGCTCATTCAGAAATATGATTCGGATCCAGCGGCAAAAGCGGCTGCTGCAACTGTTCTTGCATCGAAACTGGGTGCAGATGCGGGCCTGAAAGTGTTTCTTGGAGACGAACGACAACCAGACGCACATTCCACAGGGAAAAGCAGTGATGTTGACCTCCAACAAACTAGCGGTCTCAGGAAACGAAACCAAACAAACCCTAAATCTCCTGGAAGCAATCCAGGCCATCATGTCGGTAAAGAAACACCTCAATTTGGCGGAAATGAGGTTCCCGGAAATTCGCCACATGGACAGCTTGTTGTCGAGCATCATAATCCCGCAGCTTCAGGCGCTCAAGATGGTGGTTGGATCGCTAGAATTGCCGCATTGCTAGTAGGCGAGGACCCCACACAGTCGTACGCACTTATATGTGGAAATTGCCATATGCATAATGGGCTTGCGAGAAAGGAGGAGTTCCCGTTCATCACGTACTATTGTCCTCATTGTCATGCTTTGAATAAACCGAAAAATTCTGTACTTCCGTCGGATAAAATGTCTCCTGTTACGGAATCTCCAAAAGTAGCAGGTGCAGCGGATGTTAAGTTGACCGAACAAAGTAACGAGTCAACGGGTGAGAAAGTATCTGGTGCTAGCAGTCCCATGGTAGCTGCAGTGGAAGTGAAAGAAGCAAATGAGAAAATAGTTGACTGA | 1161 | 43.93 | MADEKEEKKNKKSKSKKWGFLSRIWNALFGLRGDDFEKRLQYISKEEATLISRMKRRSFRWRTTARNLIIFSVLLEMVAVGYAIMTTRTVDMDWRTRSLRVLPMFLLPALSFGLYYGLSSFTKFCDRRDQKTLDGLREERQAKIDELKERTNYYITQQLIQKYDSDPAAKAAAATVLASKLGADAGLKVFLGDERQPDAHSTGKSSDVDLQQTSGLRKRNQTNPKSPGSNPGHHVGKETPQFGGNEVPGNSPHGQLVVEHHNPAASGAQDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEEFPFITYYCPHCHALNKPKNSVLPSDKMSPVTESPKVAGAADVKLTEQSNESTGEKVSGASSPMVAAVEVKEANEKIVD | 386 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean11g00918 | 386 | Pfam | Predicted integral membrane zinc-ribbon metal-binding protein | 273 | 323 | IPR019273 | - | |
| Hean11g00918 | 386 | MobiDBLite | consensus disorder prediction | 203 | 229 | - | - | |
| Hean11g00918 | 386 | PANTHER | ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK | 13 | 364 | IPR040115 | GO:0071782(PANTHER)|GO:0071786(PANTHER)|GO:0071786(InterPro) | |
| Hean11g00918 | 386 | MobiDBLite | consensus disorder prediction | 352 | 366 | - | - | |
| Hean11g00918 | 386 | MobiDBLite | consensus disorder prediction | 195 | 257 | - | - | |
| Hean11g00918 | 386 | MobiDBLite | consensus disorder prediction | 331 | 370 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean11g00918 | K23292 | endoplasmic reticulum junction formation protein lunapark |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 100832 | Hean10g02671 | Hean11g00918 | |
| 101068 | Hean11g00918 | Hean13g00296 | |
| 101069 | Hean11g00918 | Hean13g00299 | |
| 101070 | Hean11g00918 | Hean3g02328 | |
| 402164 | Hean11g00918 | Hean15g03963 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr11:22369997 | Hean13g00299 | Hean-Chr13:10049890 | dispersed | |
| Hean | Hean-Chr3:164058202 | Hean11g00918 | Hean-Chr11:22369997 | transposed | |
| Hean | Hean-Chr10:144359678 | Hean11g00918 | Hean-Chr11:22369997 | wgd | |
| Hean | Hean-Chr11:22369997 | Hean13g00296 | Hean-Chr13:10030166 | wgd | |
| Hean | Hean-Chr11:22369997 | Hean15g03963 | Hean-Chr15:153079660 | wgd | |
| Hean | Hean-Chr11:22369997 | Hean3g02328 | Hean-Chr3:127547546 | wgd |