AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g00950 ATGTCACTGCTTTTGAATTCTTTTCGTAGTCATTTCTTCAAACACCTGTCGTGCACTTCTTTCTCATCGATTCGCGGCACCCAAAATCTCACTTCTCGATGCGTTTTCAAGCTAATTGGTTCCACCAGAGACCACCCATCAAGAAACTTGAGAGAATTCTTGAATTCCAGCCCAGTTACTGCAGCATTTTCCACATCTTCTTCTGCTTCTGAAACCCCAACTACCGGTTCCTACCTATCTGTGGATATTCAAAGTCGTCAAGATGTTGCTGATATGCTTTCAGAGGCACTTTTGTGTTTTGGTGCTGTTTCAACAAGCGTGTTTGAACCAGACAGCGGCGACTCTAACGATGAGATCTCGATTGTTTCGATCTTCGATGTATCTCATGACGTGCATCAAAGTATTGCACTGGCTGCTGATTCAATAGGCTTGAAAGAAACACCAGTTTACAAAGTCACCACTGGTTACCACTCCGATTGGATCGAAAATGCTCGGGAATCTTTCCATCCTATTGAAGTTACAGAAGGTCTTTGGATTGTGCCTGAATGGATAACTCCACCGGACGTCGAAGCAATGATTATAACTCTAAACCCAGGGCTCGCTTTTGGAACCGGCGACCACCCAACAACCAAACTATGTCTACTATTATTGCACACCTTAATCAAAGGTGGCGAAACCGTTTTGGATTACGGCACAGGTTCAGGGATTCTCGCAATCGCAGCACTAAAGTTTGGTGCAGCCTTAGCCGTTGGTTTCGATATAGACCCGCAAGCCATAACAGCCGCACGTCATAATGCTACCTTAAACAACATAGGACCAGACAAACTGGCACTGCAGGTTGTTCCAAGTAACATAAGTCCTGCGTCAACCGACCAATGGCAATGGGCTATGAAGAGCGACGGTGTAACGGAGCATGCTGTGGAAATTGTTACTGAGAAAGAGAAGTATGATGTAGTTGTTGCGAATATTCTTTTGAACCCGTTGCTAGATTTGGCTGATCATATTGTTTCTTACGCTAAACCTGGTGGGGTCGTCGGTCTATCTGGTATTATCTTGGAGCAGGTACCTACAGTTGTGGACCGATACTCGGATATTTTGGAAGGGATTACTGTGTCACAAATCGATGATTGGGCTTGCATAAGAGGCACAAAGAGGAAGACCGGGTAG 1167 45.07 MSLLLNSFRSHFFKHLSCTSFSSIRGTQNLTSRCVFKLIGSTRDHPSRNLREFLNSSPVTAAFSTSSSASETPTTGSYLSVDIQSRQDVADMLSEALLCFGAVSTSVFEPDSGDSNDEISIVSIFDVSHDVHQSIALAADSIGLKETPVYKVTTGYHSDWIENARESFHPIEVTEGLWIVPEWITPPDVEAMIITLNPGLAFGTGDHPTTKLCLLLLHTLIKGGETVLDYGTGSGILAIAALKFGAALAVGFDIDPQAITAARHNATLNNIGPDKLALQVVPSNISPASTDQWQWAMKSDGVTEHAVEIVTEKEKYDVVVANILLNPLLDLADHIVSYAKPGGVVGLSGIILEQVPTVVDRYSDILEGITVSQIDDWACIRGTKRKTG 388
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g00950 388 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 78 385 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
Hean11g00950 388 Hamap Ribosomal protein L11 methyltransferase [prmA]. 74 384 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Hean11g00950 388 CDD AdoMet-MTases 226 345 - -
Hean11g00950 388 Gene3D Vaccinia Virus protein VP39 167 388 IPR029063 -
Hean11g00950 388 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 379 IPR029063 -
Hean11g00950 388 Pfam Ribosomal protein L11 methyltransferase (PrmA) 78 384 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g00950 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]