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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g00956 ATGGAAATCATCACATCACCACCACAACCCACTAACCAACCACCATCTCCGGCCACCAGCAGCAACAGCAACGCCGCCCAAACACCACCACTAACACCACCACCCGTTTCAAGATCCGACCCACACCCACACCCAACAACCTTCGTTCAAGCCGACACCACTTCCTTCAAACAAGTAGTCCAGATGCTAACCGGATCATCCAACCCGACCCATCATCCAGATCCAACTCCAACTCCATCAAAGTCAACATCATCCATACCGCCGGTCAAAACCGGTCAACAAAAGAAATACAAACTCTACGAACGTCGTAACAGCCTCAAAACCGGGTTGATGATCAACCCATCTCATTCGGGTCATGGGTTATCATCGCCACGTGTCCATGAACTCTTGTCCCCCAGCATTCTTGATTTTCCGGCGCTTACGTTAAGTCCGGTGACTCCATTGATACAAGACCGGTTTAATAATAATAATGATAATAATAAATCGTCGCCGTCGGTTTCGGAGGAAGAGAGGGTGATTAAGGAAAAAGGGTTTTATTTACATCCGTCGCCCAGGGCGGCGACGCCCCAGCTGCTGCCGCTGTTTCCGGTGGCGTCGCCGAGGGCGTCGGAGCTGTCTAGTTAG 624 51.12 MEIITSPPQPTNQPPSPATSSNSNAAQTPPLTPPPVSRSDPHPHPTTFVQADTTSFKQVVQMLTGSSNPTHHPDPTPTPSKSTSSIPPVKTGQQKKYKLYERRNSLKTGLMINPSHSGHGLSSPRVHELLSPSILDFPALTLSPVTPLIQDRFNNNNDNNKSSPSVSEEERVIKEKGFYLHPSPRAATPQLLPLFPVASPRASELSS 207
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g00956 207 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 21 203 IPR039611 -
Hean11g00956 207 MobiDBLite consensus disorder prediction 1 98 - -
Hean11g00956 207 Pfam VQ motif 43 67 IPR008889 -
Hean11g00956 207 MobiDBLite consensus disorder prediction 43 71 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g00956 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
101089 Hean11g00956 Hean3g02381
402171 Hean11g00956 Hean15g04010
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:24350867 Hean17g03299 Hean-Chr17:133042600 dispersed
Hean Hean-Chr3:128749786 Hean11g00956 Hean-Chr11:24350867 transposed
Hean Hean-Chr11:24350867 Hean15g04010 Hean-Chr15:156088069 wgd