AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g00978 ATGGCAAATCGATTGTTGGCACATGAGGTCTCCGATCTTTGTCTCGGCAAGCCACCCCTCAGCTCCATCCCTATATCCGCCACCATCCGCCACGCACTTGCTGCACTCAAATCCTCCGACGACACCCACATTAGTGTCTGGTCCTGTGACCTCGACCACCACTCCACAACCCATGACCACTGCCACTGCGTCGGCAAAATCTGCATGGTCGACATCATTTGCTACCTCTGCAAAGAAGATAATATCTCATCCCCTTCCCTCGCGCTTAAAGCCCCCGTTTCTGTGTTGTTGTCGCCTATTCCTGGCGTCGTTAAACACGTGGATCCCTCGTATAGTTTGCTTGAAGCCATTGATCTAATCATCAACGGAGCTCAAAACCTTGTAGTCCCAATAAAGAACACAACCTCAAAACGGAAACAACTCCGGCAGCCAACATCACTCGCTCCGACAACCCATGCGGGCGGCCGCGAGTTTTGCTGGCTGACACAAGAAGATGTGATCAGGTTCCTCCTCAGCTCAATCGGATTATTCTCCCCAACCGCCGCGTACTCAATCGAGTCACTCGGAATCATTGATACAAAAATCCTCACAATCAACTACCACTCGCCGGCTTCGAAAGCACTCGCCGCCATTTCCACCTCTCTCTCCGACCAAACTTCCGTCGCAGTCATTGACGACGACGGCGTGTTGATCGGAGAAATATCCCCCTTTACACTCGCATATTGTGACGAAATGGTTGCGGCCGCGATCACGACGTTGTCCGCCGGTGATCTAATGGCGTACATCGACTGCGGCGGGCCGCCCGAGGATATAACAAAAGTAGTACATGCAAGGTTAAAAGAAAAGAATCTGTACGGAATGCTGGACGAATTTTTAATTTATTCGTCTGGCATTCCGTACTGTAATAGTACTAGTTCTTCTTCTGACGAAGAAACTACTGTACTGTCTCCTGTGACCACTAGGTCTGGGAGGTACAACCGGTCAGATAAATTTATAATGAGGAGGGCGGAAGCTATCGTGTGCCAACCGAGAAGCTCGTTGGTGGCGGTGATGATTCAGGCAATTGCGCTTCGGGTGAGTTATGTGTGGGTGATTGAAGAAGATTGTACGGTGGTCGGAATTGTGAAGTTTTCCGGCATGTTGAAAGTTTTTCAGGAGCATTTGGAGAGTTTGATTGACTAG 1182 49.92 MANRLLAHEVSDLCLGKPPLSSIPISATIRHALAALKSSDDTHISVWSCDLDHHSTTHDHCHCVGKICMVDIICYLCKEDNISSPSLALKAPVSVLLSPIPGVVKHVDPSYSLLEAIDLIINGAQNLVVPIKNTTSKRKQLRQPTSLAPTTHAGGREFCWLTQEDVIRFLLSSIGLFSPTAAYSIESLGIIDTKILTINYHSPASKALAAISTSLSDQTSVAVIDDDGVLIGEISPFTLAYCDEMVAAAITTLSAGDLMAYIDCGGPPEDITKVVHARLKEKNLYGMLDEFLIYSSGIPYCNSTSSSSDEETTVLSPVTTRSGRYNRSDKFIMRRAEAIVCQPRSSLVAVMIQAIALRVSYVWVIEEDCTVVGIVKFSGMLKVFQEHLESLID 393
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g00978 393 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 19 387 IPR050511 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Hean11g00978 393 SUPERFAMILY CBS-domain pair 4 171 IPR046342 -
Hean11g00978 393 SUPERFAMILY CBS-domain pair 182 391 IPR046342 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g00978 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:24802537 Hean5g02789 Hean-Chr5:152465097 dispersed
Hean Hean-Chr11:24802537 Hean4g04089 Hean-Chr4:199824364 transposed