Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean11g00996 | ATGGCACACTTGTTGGCTCAGTTTCAGTCGATCAAGATTTCATGTGACGGCCTCGTGATCGCGGTGAAAGATGTGAGCGATTTATGGCCTCTTGTGAAAGAAAAGTTTGAGGAACGGCTTCCGTTTAAACGCGCTATGTTAAACAACAAAAACCATTATCCTGTAACTGTGGACAACCTGCAAGCTGAGTTTTTGTTAACTACCGATTCGAGGATCAAAAGTCGGGTCCCTCAGGATCAACTGTTCTTTTGTTTTCAAGAACCTTATGCAACTGTGGTTCTTGTAGCATGTGAGGATCTAGACGAGTTCAAGACAGTATTAAAACCGCGTCTGAAGTTAATCTTGCAAAATGAAGAGGAGTGGTTCATCGTGTTTGTGTCCAAAGCTAAATCGGAAAAGGACTCAACGAGCAAGATGGAAAAAAAGGTTTACGCAAGACTTGAAGTTGATTTCAATTCAAGGAGGAGAGAAAGGTGTTGCAAGTACGACTTGCATGGAACCGTAGTAACCTTTTGGGATGACTTTGAACTCAAAATCATGGAGTGCATCAGAAACACATTTGATAGGCGCGTCCAGTTTTACGAGGACGAGATTCGTAAGCTCAACGAACAACGTCTTACGCCCGTTTGGACCTTCTGTAACTTTTTCATCCTCAAAGAAAGCCTGGCATTCATGTTAGAGATGGCTAATCTTCATGAGGATTCGTTGCGCGAATATGATGACCTAGAGTTGTGTTACATGGATACAGTTAAAAATGAAGACAAAAAGAGGGAATTTGGAGGAACGGAACATGGAGATGATCAATCTGCCATACTAAGCCGTAACAACAAGCAACTCACACAGATCGTTCTCGAAACTTCCTTTAGGGAGTTTGAATTCCAACAGTACCTATTTGCATGTCAAGCTAAGCTGTTGTTTGATCTAAACCGTCCATTTGACGTTGCATCAAGAGGGTTCTCATTCATAGCCAGTTTCTCAGAAGCATTGGGCCGGCAAGAGAGTAATTTGCCTTTCTGTACGAGAGAAGTTTGGATCCTGACCTCATGTTTGAGCTTGATCAATGCAACTGCTGACCATTACAGAGATGGGCAAATAGCACCGGATTTAGAACGAGAATATTATCGTATACGGGCTGAGTTATACTCTCAATCCCGAGTAAAGTTAATGAGACTTGCATATCTTATCGGGTTCGGATCTACTATAGAAAGAAGTCCACTCAACAGTGCTTCACTTAGCATGTTACCTTGGCCTAAGCCAGCAGTTTGGCCTTCAGTTCCCTCTGATGCTTCATCTGAGGTTCTTGACAAAGAAAAGACAATTCTTCAAGTTACTCCAAGAATCAAGCACTTTGGTATTCAGAGCAAACCATTGTCTCTTGAACCCTCTTCTCTTCTGTCTGATGCAAGCTCGGTTGATACCACGAGACTTTCAGAACTTTTTGTGGCTGCTGAACACGCTCTTCGTGCGACTATTTCTGATCCTGATTTACGGAAATCTTTATCGTCTTTAGAGGAATTTGAGAAAAAATATCTGGACCTATCAAAGGGTGCTGCTGATAACTATTATCATGCATGGTGGAAAAGGCATGGAGTCGTTTTCGACGGCGAAATTGCGTCTGTTTATTTCAAACATAAGAATTACGAACAGGCTGCGAGTTCATACGAAAAGGTTTGCGCTCTTTATTCTGGTGACGGATGGCAAGATTTGTTAGCGGATGTGCTTCCGAATCTAGCCGAGTGCCAGAAAATACTTAACGATAAGCCTGGTTACTTATCGTCTTGTGTGAGATTACTTTCGTTAGATAAAAACTTGTTCGCGGTCAAAGAACGCCAAGCGTTTCAGTCAGAACTAGTTCATCTTGCACATAGTGATATGGCTGATCCGGTCCCTTTAGACGTGTCGTCACTGATAACATATTCTGGTAATTCGGGTCCACCCGTGGAGCTTTGTGATGGGGATCCGGGTACCTTGACTGTAACTTTATGGAGTGAGTTTCCTGATGATATTTCTCTTGAATCGCTTAGTCTTACGTTGACCGCTACAAATAATGCTGATGAGCGTGTTAAGACGATCAAGAGCAGTGGTGTTACTATGTTGAAAACGGGTTGGAATACGATTGATCTATCGTTGCCCCCACAGAAACCGGGCTCTTACGAGTTGGGAGTTCTTACGGGGCAGATTGGTCATTTAAGATTCAGGTCTCATGGTTTTTCCAGAGGTGGGCCAGCAAATAGACATGCTGATGATATGAGTTTTGATAAGCCTGCTAAACCTGTCTTGAAGGTGTTCAAACCAAGGTCCCTTGTGGATCTATACGCAGCAGTTTCATCCGCATTATTAATGAACAAGCCTCAGTGGGTCGGGATCGTTATCAAGCCATTAAACTACTCCCTCAAGGGTGCTCGTCTACACATTGACGTCGGGCCTGGGTTAAAGATCGAGGAGTCACGTGCCATTGAAATCGAGAAATATGCCGATAACGATAATAACAGTTCTAATTCTTCTAATATTCCCACAGAAATTTCTCAAATTAATCTTACAAATGGTAGTATAGAGTTACCAGATTGGGCCAGCAATATAACTAGCATTTTTTGGACTCCTGTCTGTGCCATTAGTGATGGGCTGCCAAGAGGAACATCTGCAGGCGTAATATCGACTCAAAGGCCAAGCATTGCGAATGGGATGAGGACTTTAGCCCTGAAACTTGAATTCGGGGTGTCACATAATCAGATAATGAAAAGGACTATACCTATTCATTTCACCGACCCATTCCACGTCAGCACACGGGTCACAGACCAGGGCAGTGACGGTTCTTTGTTTTTGCAGGTGATATTACAGTCACAGGTGAAGGCCTCATTAACCATACATGATGTTTGGTTAGATTTACAAGATGGGTTTTCTCACGCTGGACGAGGTGATGGGAGACCAACATCTGGCATGTTCCCATTGATTGTTCCTCCAGCTTCTAATTCTGGAGTTTTGTTTGGTATATCACTTGGAGCTACAACCGCCGAAGATGAAGGGAAAGCGGAGCATCGTGATACAATAATAAATATAAAATATGAAATATGTGGGGATAGAAATCATGGATCCCACACCCCTATCTCTCTAAAACCCGAAGGACCCGAAAATGCCGACGTCACACCATTTTTAACATTCAGAAGTGGTCTCGTTTTACAACGGCCCGTGCAAGAACCTTTATTAGCAGTTGCATTTCTTCCTTTACCCTCAAACGGTCTCACAGTTGGTCAGCTTGTCACATTTAGATGGAGACTCGAAAGGTTGACCAGCTTTGACCTCAAGGACGAATTATTGTACGAAGTCAACGCGAATTCAAGGAATTGGATGTTTGCCGGAAGGAAACGAGGCCATGCCCCTCTCTCCTCAAAACAAGGTGCAAGAATTGAGATATCAATAATGTGTGTGCCACTAGCTGCTGGACATGTGCGCCCTCCACAACTCCACTTGCCAAATGTCAATAAGGCCCATATATGCTGCAATCCAGCAGGCCCACATTTAGTGTGTGTCCTGCCTCCACCTTTGAGCTCATCATTTTGCATTCCAGCATGA | 3570 | 43.47 | MAHLLAQFQSIKISCDGLVIAVKDVSDLWPLVKEKFEERLPFKRAMLNNKNHYPVTVDNLQAEFLLTTDSRIKSRVPQDQLFFCFQEPYATVVLVACEDLDEFKTVLKPRLKLILQNEEEWFIVFVSKAKSEKDSTSKMEKKVYARLEVDFNSRRRERCCKYDLHGTVVTFWDDFELKIMECIRNTFDRRVQFYEDEIRKLNEQRLTPVWTFCNFFILKESLAFMLEMANLHEDSLREYDDLELCYMDTVKNEDKKREFGGTEHGDDQSAILSRNNKQLTQIVLETSFREFEFQQYLFACQAKLLFDLNRPFDVASRGFSFIASFSEALGRQESNLPFCTREVWILTSCLSLINATADHYRDGQIAPDLEREYYRIRAELYSQSRVKLMRLAYLIGFGSTIERSPLNSASLSMLPWPKPAVWPSVPSDASSEVLDKEKTILQVTPRIKHFGIQSKPLSLEPSSLLSDASSVDTTRLSELFVAAEHALRATISDPDLRKSLSSLEEFEKKYLDLSKGAADNYYHAWWKRHGVVFDGEIASVYFKHKNYEQAASSYEKVCALYSGDGWQDLLADVLPNLAECQKILNDKPGYLSSCVRLLSLDKNLFAVKERQAFQSELVHLAHSDMADPVPLDVSSLITYSGNSGPPVELCDGDPGTLTVTLWSEFPDDISLESLSLTLTATNNADERVKTIKSSGVTMLKTGWNTIDLSLPPQKPGSYELGVLTGQIGHLRFRSHGFSRGGPANRHADDMSFDKPAKPVLKVFKPRSLVDLYAAVSSALLMNKPQWVGIVIKPLNYSLKGARLHIDVGPGLKIEESRAIEIEKYADNDNNSSNSSNIPTEISQINLTNGSIELPDWASNITSIFWTPVCAISDGLPRGTSAGVISTQRPSIANGMRTLALKLEFGVSHNQIMKRTIPIHFTDPFHVSTRVTDQGSDGSLFLQVILQSQVKASLTIHDVWLDLQDGFSHAGRGDGRPTSGMFPLIVPPASNSGVLFGISLGATTAEDEGKAEHRDTIINIKYEICGDRNHGSHTPISLKPEGPENADVTPFLTFRSGLVLQRPVQEPLLAVAFLPLPSNGLTVGQLVTFRWRLERLTSFDLKDELLYEVNANSRNWMFAGRKRGHAPLSSKQGARIEISIMCVPLAAGHVRPPQLHLPNVNKAHICCNPAGPHLVCVLPPPLSSSFCIPA | 1189 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean11g00996 | 1189 | Pfam | Trafficking protein particle complex subunit 10, TRAPPC10 | 1088 | 1159 | IPR022233 | - | |
| Hean11g00996 | 1189 | SUPERFAMILY | TPR-like | 537 | 614 | IPR011990 | GO:0005515(InterPro) | |
| Hean11g00996 | 1189 | Coils | Coil | 184 | 204 | - | - | |
| Hean11g00996 | 1189 | PANTHER | EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1 | 9 | 1188 | IPR045126 | GO:0006891(PANTHER)|GO:0034498(PANTHER)|GO:0048193(InterPro)|GO:1990071(PANTHER)|GO:1990071(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean11g00996 | K20307 | trafficking protein particle complex subunit 10 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 101092 | Hean11g00996 | Hean3g02456 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr11:25474956 | Hean3g02456 | Hean-Chr3:130883446 | dispersed |