AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g01015 ATGGCAAGCAAAAGAAGTTTGTTTCTTGTCACTTTGGCAACAATTGCTATTTCTGGTGCACTCACACAAGTCAAAGCTTATTCAAGCTCGTACTGTGGCATAGGGTCCCGTTGCGAGCACCAAACCCTTTATTGCCCTTCGGAGTGCCCCTCTAGTGAGTCCAATGATCCTGACGCTAAAGTTTGCCGCATCGACTGCTATTCTCCAAAATGCAAAGCCGAATGCAAACACCGCAAACCAAACTGTAACAGCCCGGGATCAGCATGCTACGACCCACGATTCATCGGTGGAGACGGCATTGTCTTCTACTTTCACGGCAAGGTCAACGAGCATTTCGCCTTGATCTCCGACTCCAACCTCCAAATCAACGGCCGATTCATCGGCCACAGGCCCGCAGGCCGATCCAGGGACTTCACCTGGATCCAATCTCTTGGGCTCCTCTTCAACTCCCACACTTTCTCTCTAGAAGCAACCAAATCCGCCACATGGGACGGCGAAATCGACCACCTTAAATTCGCATACGACGGAGAAGAGATCTCTCTACCCATCGGCGGGCTTTCCACGTGGAAGTCACGTGAGGAAGAAATAAAAGTGGAGAGAACTTCCGGTTTGAACAGTGTGATGGTAACTATTCCTGGAGTTGTGGAGATTTTGGCAAATGTGGTTCCTGTGACCGCTGAAGATGACCGAATTCACGGTTACAATGTTCCATCCGATGATTGCTTTGCTCATTTGGAAGTTCAGTTCAGGTTTGCTGGACTTTCTGACGGCGTTGAAGGCGTGTTGGGGAGGACGTATCAGCCGGATTTCAAGAACCCGGCGAAACCTGGGGTGGCAATGGCGGTTGTGGGAGGCGAAGACAAGTATAAAACTAGCTCGTTGTTGGCTGCGGATTGCGCAAACTGCGTGTTTGATTCGAGTAATGTTGTAGGGAATGAGAAGCAGATGGTTACGTTGGATTGTTCTGCTAAAGGGTTGTTCCAAGGAAATGGGATTGTTTGCAAGAAATGA 1011 49.46 MASKRSLFLVTLATIAISGALTQVKAYSSSYCGIGSRCEHQTLYCPSECPSSESNDPDAKVCRIDCYSPKCKAECKHRKPNCNSPGSACYDPRFIGGDGIVFYFHGKVNEHFALISDSNLQINGRFIGHRPAGRSRDFTWIQSLGLLFNSHTFSLEATKSATWDGEIDHLKFAYDGEEISLPIGGLSTWKSREEEIKVERTSGLNSVMVTIPGVVEILANVVPVTAEDDRIHGYNVPSDDCFAHLEVQFRFAGLSDGVEGVLGRTYQPDFKNPAKPGVAMAVVGGEDKYKTSSLLAADCANCVFDSSNVVGNEKQMVTLDCSAKGLFQGNGIVCKK 336
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g01015 336 Pfam Root cap 248 304 IPR009646 -
Hean11g01015 336 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 28 336 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g01015 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:26145969 Hean15g03120 Hean-Chr15:106057308 dispersed
Hean Hean-Chr11:26145969 Hean2g03023 Hean-Chr2:167829231 transposed