Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean11g01017 | ATGTCTGTATCTAATCACCATCGTTCAAATTCCGACGGAAAGCAACGGCGGTTATTTCCGTTTTGGCAATCGTCGACAAATAATCTTCAATTTCAGAGTAACAATAGCAACGGAAACGGTGTCGTATCGACTGGCCGTTCTTCAAATAAGTTGTCATCGGTGGCGAAATCTCTTCTGCCAGCTAGGCGACGGCTCCGGCTTGATCCGGCTAACAATCTCTACTTTCCGTATGAGCCTGGTAAACAGGTGAGAAGCGCTGTTCGGATCAAGAATCATAGCAGTTCTCATGTTGCTTTTAAGTTTCAAACCACCGCACCTAAGAGCTGTTATATGCGACCTCCTGGTGGCGTTCTGGCTCCTGGGGAAAGCCTCATTGCTACAGTTTTTAAGTTTGTTGAGCAACCGGACAAGAACGAAAAACAATTGGACCAAAGGAGCAAGGTGAAGTTCAAGATCATGAGCCTCAAGGTGAAAGAAGGAACAGACTTTGTGCCTGAATTGTTTGATGAACAAAAGGATGAAGTAGTTGTTGAGCGGATTTTGCGTGTTATTTTCATAAATGCGGATCGCCCTACCCCAGCATTGGAAAAACTGAAACATCAGCTGGCTGAAGCCGAAGCTGAATTAGAATTACGGTTACGGAGAAAACCTCAAGTGGATACTGGTCCAAAAGTTGTGGGCCAAGGGCTTGTTATTGACGAGTGGAAAGAACGAAGGGAGAAATACCTTGCTCGACAACAGGTGGAGGCTGTAGATTTGATGTGA | 765 | 45.36 | MSVSNHHRSNSDGKQRRLFPFWQSSTNNLQFQSNNSNGNGVVSTGRSSNKLSSVAKSLLPARRRLRLDPANNLYFPYEPGKQVRSAVRIKNHSSSHVAFKFQTTAPKSCYMRPPGGVLAPGESLIATVFKFVEQPDKNEKQLDQRSKVKFKIMSLKVKEGTDFVPELFDEQKDEVVVERILRVIFINADRPTPALEKLKHQLAEAEAELELRLRRKPQVDTGPKVVGQGLVIDEWKERREKYLARQQVEAVDLM | 254 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean11g01017 | 254 | PANTHER | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN | 64 | 243 | IPR016763 | GO:0005789(PANTHER)|GO:0005789(InterPro)|GO:0005886(PANTHER)|GO:0061817(PANTHER)|GO:0090158(PANTHER) | |
| Hean11g01017 | 254 | Gene3D | Immunoglobulins | 60 | 188 | IPR013783 | - | |
| Hean11g01017 | 254 | Coils | Coil | 195 | 215 | - | - | |
| Hean11g01017 | 254 | ProSiteProfiles | Major sperm protein (MSP) domain profile. | 64 | 186 | IPR000535 | - | |
| Hean11g01017 | 254 | Pfam | MSP (Major sperm protein) domain | 65 | 172 | IPR000535 | - | |
| Hean11g01017 | 254 | SUPERFAMILY | PapD-like | 54 | 196 | IPR008962 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean11g01017 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr11:26154390 | Hean5g00197 | Hean-Chr5:4933432 | dispersed | |
| Hean | Hean-Chr11:26154390 | Hean5g00193 | Hean-Chr5:4872913 | transposed | |
| Hean | Hean-Chr11:26154390 | Hean16g02759 | Hean-Chr16:140766874 | transposed |