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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g01142 ATGGCTAGCATGCGACTTGAGGTTGTATTCGAAGATCATACTCCACATAAATGGCGTGTTCCTTTGAAAGAAGACGTTTTTGGTGCATTTATGGCGAAAGGAGGTCCAGTCATGCATAAGTTCTTTGATCCATCAGACGCGTTTCCACTTTGGGAATTTGAGCCGGGTGTGTTGTTGTCTGATCTTCAGAACCCGTGTGTGGATTGGTTTCAAACAGAAGCGTGTTATGTCCTAAAAACCGAGCTACCAGATATAGAAAAAAGCAGCATTAGAGTTTATGTTGAGAATGGGAAGGTTATGGAGATTAGTGGGCTATGGAACCACAAAGGAGAATCAAGAGCGTCACCGGACTGGCAAAGTGGCAAATGGTGGGAACGAGGCTTCGTACGCAGGCTAGAATTGCCTGAAAATGTGGATTGGAAGAAAACCGAGGCGCATGTGAACAACGACACCATTTTGGACATCAGACTTCCCAAACTTCAACAGAATGTGACATAA 498 44.58 MASMRLEVVFEDHTPHKWRVPLKEDVFGAFMAKGGPVMHKFFDPSDAFPLWEFEPGVLLSDLQNPCVDWFQTEACYVLKTELPDIEKSSIRVYVENGKVMEISGLWNHKGESRASPDWQSGKWWERGFVRRLELPENVDWKKTEAHVNNDTILDIRLPKLQQNVT 165
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g01142 165 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 57 165 IPR002068 -
Hean11g01142 165 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 3 163 - -
Hean11g01142 165 Pfam Hsp20-alpha crystallin family 69 163 IPR002068 -
Hean11g01142 165 Gene3D - 27 165 IPR008978 -
Hean11g01142 165 SUPERFAMILY HSP20-like chaperones 40 162 IPR008978 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g01142 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3206433 Hean Hean11g01142 Hean-Chr11:30710689 Hean1g01292 Hean-Chr1:68279309
3261560 Hean Hean11g01142 Hean-Chr11:30710689 Hean7g02783 Hean-Chr7:142145195