Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean11g01246 | ATGGATGTGGTCGCTATTGACCCCTCAATTTCATCGTACCAAACAACCCCTAAACTTAAACTCCCCCTTTTCAGATTACCATCAAGAACACCCCCACGACTCTTACATTGTACCCCTCTTCGATTCAGCCACAAGATTGTTCTAACAAACTTTCACGATTCAAGATTCAACAGTGTTGTTCAAAAAGACAGAGGCTTGAGATCTGTTTGGGTCAAAAGCAGCAGCAGTCTTGAAAACCCCTCAACTTTGGATTCTAATTTTGTTGAAATCTTGGTTAAAAAAGGTTTGATTTTGGGGGCTGTTTGTTGTGTGTTGGGATGCAGGGGGGTTTTGGCTGCAGAAGGGGTTTTAAATGGTGGGAATTTTGTGGGTTTGGAGCAGCAGGTTAAAGGGTCTATGGTCAATTATATGCCAAAAGTTTTGATGGTTCTTAAGGTTTTGAAGGAACAGGGGTTGATTTTGGCTGCACTTTTTGGTTTGTCTGCTTTTTTTTCTATGGCTGAGACTTCAATTACAACTCTTTGGCCTTGGAAGGTTAGAGAGCTGGCTGAGAAAGAGTCTGAGAATGGTGTGTTCAAAATGCTGCGGAATGATGTTACGCGGTTCTTGACTACGATACTTATTGGCACAACTGTTGTAAATATTGGAGCAACAGCACTAGTGACTGAAGCAGCAACTGCGATATTTGGTGAAGCAGGTGTGAGTGCTGCCACAGGAGTAATGACGGTTGCAGTCTTGTTACTCACTGAAATAACTCCAAAAAGTATAGCCGTTCATAATGCCACCGAGGTTGCAAGAGTTGTGGTCAGGCCGATTGCATGGCTTTCTTTAGTCTTATATCCTGTTGGAAGAGTTGTAACTTATCTCTCTATGGGAATGCTCAAGTTGCTCGGTCTCAAAGGAAGAAGTGAACCGTATGTCACTGAAGACGAACTGAAGTTGATGTTACGAGGAGCTGAATTAAGTGGGGCCATAGAAGAGGAAGAACAGGATATGATTGAAAATGTTTTAGAAATTAAAGACACATATGTTCGTGAAGTTATGACACCTTTGGTTGATGTTGTAGCTAGTGATTCTAGTGCAACGTTAATCGATTTCCACACCTTGTGGGTAACTCATCAGTATTCAAGGGTACCTGTTTTTGAACAACGTGTAGATAATATTGTCGGCATTGCATATGCAATGGATCTATTAGACTATGTTCAAAAGGGGGACCTTCTAGAAAGTACGACGGTGGGGGATATGGCTCATAAACCTGCTTATTTTGTGCCTGATTCAATGTCGGTTTGGAATCTTCTTAGAGAATTTCGCATTAGGAAGGTACACATGGCTGTTGTCTTGAACGAATACGGTGGGACTGTTGGAATTGTAACACTGGAAGATGTAGTTGAAGAAATCGTTGGTGAAATTTTTGACGAAAATGATTCAAAAGAGGAAATAGATAAAAAGACTGGTTATATAGTAATGAGGGCGGAAGGAATTTATGATGTGGATGCAAATACTTCAATCGACCAGCTTTCCGAAGACCTCAACATAAAGATGCCAGAGGGTCATCAATACGAAACGGTGTCGGGGTTTGTGTGTGAAGCGTTTGGATACATCCCAAAAACAGGTGAAAGCATAAAAGTGGTACTTGAGAAGGAAGAAGTTGATGACGAGTATATCGAGGATGATGGCGATCGCCAACATCAAAAAGAAAAAGAAAAGAGCCAAGTATTTCAAATAGAGATTTTAGCAGGCAATGCTAGAAAAGTTGGTGCGGTGAGGTTTGAACGGGTAACCAATGAGGAGGAAACGGAGGAGAAGAAGGTGGTGGTTCCGGTCATCACGAAAAGGAAATGGGGCGGTGATGACGATGATGAAACGAATATAATTGATGAGGGTGAAGATGATGTAATTCCACAACATGAAATAAAAGAGGGAGAATGA | 1929 | 41.52 | MDVVAIDPSISSYQTTPKLKLPLFRLPSRTPPRLLHCTPLRFSHKIVLTNFHDSRFNSVVQKDRGLRSVWVKSSSSLENPSTLDSNFVEILVKKGLILGAVCCVLGCRGVLAAEGVLNGGNFVGLEQQVKGSMVNYMPKVLMVLKVLKEQGLILAALFGLSAFFSMAETSITTLWPWKVRELAEKESENGVFKMLRNDVTRFLTTILIGTTVVNIGATALVTEAATAIFGEAGVSAATGVMTVAVLLLTEITPKSIAVHNATEVARVVVRPIAWLSLVLYPVGRVVTYLSMGMLKLLGLKGRSEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTYVREVMTPLVDVVASDSSATLIDFHTLWVTHQYSRVPVFEQRVDNIVGIAYAMDLLDYVQKGDLLESTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIDKKTGYIVMRAEGIYDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPKTGESIKVVLEKEEVDDEYIEDDGDRQHQKEKEKSQVFQIEILAGNARKVGAVRFERVTNEEETEEKKVVVPVITKRKWGGDDDDETNIIDEGEDDVIPQHEIKEGE | 642 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean11g01246 | 642 | CDD | CBS-pair-CorC-HlyC-assoc | 344 | 464 | IPR044751 | - | |
| Hean11g01246 | 642 | Gene3D | - | 323 | 478 | IPR046342 | - | |
| Hean11g01246 | 642 | Pfam | Transporter associated domain | 490 | 592 | IPR005170 | - | |
| Hean11g01246 | 642 | ProSiteProfiles | CNNM transmembrane domain profile. | 143 | 329 | IPR002550 | - | |
| Hean11g01246 | 642 | ProSiteProfiles | CBS domain profile. | 348 | 409 | IPR000644 | - | |
| Hean11g01246 | 642 | ProSiteProfiles | CBS domain profile. | 415 | 473 | IPR000644 | - | |
| Hean11g01246 | 642 | SUPERFAMILY | FAD-binding-transporter-associated domain-like | 486 | 601 | IPR036318 | GO:0050660(InterPro) | |
| Hean11g01246 | 642 | PANTHER | HEMOLYSIN-RELATED | 120 | 603 | - | - | |
| Hean11g01246 | 642 | MobiDBLite | consensus disorder prediction | 613 | 642 | - | - | |
| Hean11g01246 | 642 | FunFam | Magnesium-cobalt efflux protein CorC | 325 | 475 | - | - | |
| Hean11g01246 | 642 | SMART | CorC-HlyC-2 | 488 | 594 | IPR005170 | - | |
| Hean11g01246 | 642 | Pfam | CBS domain | 412 | 467 | IPR000644 | - | |
| Hean11g01246 | 642 | Pfam | CBS domain | 344 | 402 | IPR000644 | - | |
| Hean11g01246 | 642 | Gene3D | - | 485 | 578 | IPR016169 | - | |
| Hean11g01246 | 642 | Pfam | Cyclin M transmembrane N-terminal domain | 152 | 329 | IPR002550 | - | |
| Hean11g01246 | 642 | SUPERFAMILY | CBS-domain pair | 331 | 470 | IPR046342 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean11g01246 | K03699 | magnesium and cobalt exporter, CNNM family |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr11:35108609 | Hean4g04359 | Hean-Chr4:204308966 | dispersed |