AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g01261 ATGAAGATGAACACCAAATACCTAAAACTCTTCATCTTCCTCTTCCTCCTCAACTCCATCACCCTCATCCTCTACTTCTCCTCCCACCCCCACCTCTTCCACCACCGTCCCACCACCCCCACCACCACCACCCACCACCAATCCACCATCTCCGACCACACCCACCTCCCATCTCCCCCCAATTCCAACAAACCCTGGCCAATCTTACCTTCCTACCTCCCATGGTCCTTAAACCCCAACACCCACTTCAGATCATGCGAATCCTACTTTGGCAACGGCTTCACTCGCCGCATCGATCTTCTAAAACCGGTTCAAACCGGTGGGTGGTTCAGGTGTTTTTATAGTGAGACGCTGAGGAGTTCGGTGTGTGAGGGTGGGGGGTTAAGGATGCATCCGGAGAAGGTTAAGATGTCAATGGGTGGTGAGGTTTTGGAGAGTGTGATTGGTAGATCGGAGGATGAGGAGTTGCCGGAGTTTGAAGATGGGGCCTTTGATTTAGTGGGTCAGAAGAGGGGCGTTGAGAGGGTTGCTAGTGAGGGGTTTTTGAATGAGTTTGTTCCGAGAGGGGCGGTTGAGAGGCACACGATGAGGGATTTGATCGGTTCGATGCGGTTCGTTGGGGCGGATGAGTTCCATTGCTCTGAGTGGGTTGAGGAGCCAACGCTTTTGATCACCCGTTTCGAGTATGCAAACCTTTTTCACACTATAACAGACTGGTACAGTGCCTACGTGTCTTCAAGAGTTACCGGCTTGCCAAACAGACCTCAAATAGTTTTTGTAGATGGTCACTGCATGACACAATTGGAAGAAACATGGAAAGCCGTATTCTCGGGTTTGCGATACGCTAAAAACTTCAGCGGGCCCGTTTGCTTTCGTCACGCTATCCTTTCACCTTTGGGCTACGAAACCGCTATGTTCCGTGGTCTATCCGAAACCGTCGATTGTGACGGGGCTTCGGCCCATGATTTATGGCAGAAGCCCGATGACAAAAAAACAGCCCGAATCTCGGAATTCGGGGAGATGATACGGGCCGCGTTTTCACTTCCGTTACACCAACAACACCACAGCTCAAAATCCGGTTCACGAAATCACAACGTCTTGTTCGTCAGGCGCGAAGATTATCTCGCACATCCCCGCCATGCTGGCAAGGTGCAATCGAGACTCAGTAACGAACAAGAAGTATTCGACGCGTTAAAAAGCTGGTCAACGGGTCATACCGAATGTAAAATTAATTTAATCAACGGGCTTTTTGCGCATATGTCGATGAAAGAACAGGTGAGAGCGATTCAAGACGCATCGGTTATCGTGGGTGCGCATGGGGCGGGACTTACTCACATAGTGTCGGCAACACCGGACACAGAAATACTAGAAATCGTTTCTAGCGAGTATCGAAGGCCTCATTTTGAACTAATTTCGAAATGGAAAGGACTAAATTACCACCCGATATATTTAGGTGGGTCCCACGCTAGTCCCTCGGTAGTTATTGCCAAGCTCAGGGACATTTTGAAGAACATAGGATGCTGA 1524 49.8 MKMNTKYLKLFIFLFLLNSITLILYFSSHPHLFHHRPTTPTTTTHHQSTISDHTHLPSPPNSNKPWPILPSYLPWSLNPNTHFRSCESYFGNGFTRRIDLLKPVQTGGWFRCFYSETLRSSVCEGGGLRMHPEKVKMSMGGEVLESVIGRSEDEELPEFEDGAFDLVGQKRGVERVASEGFLNEFVPRGAVERHTMRDLIGSMRFVGADEFHCSEWVEEPTLLITRFEYANLFHTITDWYSAYVSSRVTGLPNRPQIVFVDGHCMTQLEETWKAVFSGLRYAKNFSGPVCFRHAILSPLGYETAMFRGLSETVDCDGASAHDLWQKPDDKKTARISEFGEMIRAAFSLPLHQQHHSSKSGSRNHNVLFVRREDYLAHPRHAGKVQSRLSNEQEVFDALKSWSTGHTECKINLINGLFAHMSMKEQVRAIQDASVIVGAHGAGLTHIVSATPDTEILEIVSSEYRRPHFELISKWKGLNYHPIYLGGSHASPSVVIAKLRDILKNIGC 507
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g01261 507 MobiDBLite consensus disorder prediction 38 61 - -
Hean11g01261 507 PANTHER PUTATIVE-RELATED 13 507 IPR007657 GO:0016757(InterPro)
Hean11g01261 507 MobiDBLite consensus disorder prediction 38 59 - -
Hean11g01261 507 Pfam Glycosyltransferase 61 353 455 IPR049625 GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g01261 K03714 glycoprotein 2-beta-D-xylosyltransferase [EC:2.4.2.38]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:35502406 Hean4g01459 Hean-Chr4:50870268 dispersed