AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g01362 ATGAGCAGCGGCGAGGCTAGGGTTTCCATTCCTCACAACGCCCGTAAACTTATTCAACAAGTCACCAAAACCCTAACCCACAACCACACCGATGCCTTCGTATACTCCACCCTCATCGACTCCGCCATGGATCCCGCCGAAGCTACCCGCAGATTGAAGATGATTCACGACATTCGAGAGATTGCCGGAAAGCACAGCGTTGAGGATGTCTATACAATGCTCAAAGAGTGTAATCTCGATGCTAATGAAGCTGCTCAGAGGCTGTTGTATATCGATACTTTTCATGTGGTTAAAAAGAAACACGACCGGCGAAAAATCATAAGCAGTGATGTTTCTCAAGAGAATAAACAGACACGGGGTAATCAATGGAGGGGAGATAAGGGTGGGCGAGGGACTTTCTACGCGTCAAAAGTTTTTGAAGATGTTGGCGGTGGGAGAAATTTGAGTTCCGGGAAGGAATATGGTGCTACTAATCGCGTAGAGAAGGTTTTGAAGCCAGCCGTGCCAGGTCATATGGGAAAAGAAAACAACATAGTACATGTGTCAAATTCTTGTGCCAATGTCAATGGTACACCAGCTTTATCCAATGGGAATTACAACCATAAGCTTGCATCTGTATCACCTGCAGATATCGCATCCCCTACCTCGGATCATGTTGTCGTTTCATCTCAGAACACCAAGCACATGTGCGCTGTGGGTACAATAAAATGTGAGATCGTAAAACGTAGTGGTTCTAATGAATCAAATGCAAGAATTCCAGCTGGCAAGAAGTTTACTGCTGATCAGTCAGGTACAGGTACCATTTCCATTATCGCAGAAGCTGTAGATTCTGACCGAAAGTCGAACGTAGCTGAAAAGAACCAGATCTCAGATTCTTCGCAGCCTCTTTTGTCGTCAACCCAAAACAGCGGACAGGTTGTCAATTCTATTCAGGATAATCAGCAGCATCCTCAATCATTAAAAGAGCCTCTAAATGATTTGGTTCCCGAAGAAGAATCTGAGTTGACTATATCAGCTTCGAAACTTGATGTGATGTTGGAGAAGTTGACGTTATCTTCTCACCAAGCTGTTATTTTCCCTGATCATATACAAGTTCCCGAAAAATATAAAAGTCAGTTCGTATTCGGAACTTTGGATGTCACTATCGATGATTGCAAGCCTATTTCCGTTACTGAATCTACTCAGCAAAACGAAGTTGTAAAAGAACCTTCTTTGAGCAATGGAAACGCTTCCGCAATAGCGCAGGAAGGTGAAGTTCAAGATCATGTTTCTGAAGATGTATCGTGTTTAGAAGATAACATCGCACCTGAATCTTCTGCTCCAACACACGAGCAGACGGTGGAGATAGTACCCCCTCCCCCTTCAACGGGATTTCAGAATATTCCGGTTCTTCAAACCACAAGGGACTACTATGGTTATATGCCACCTCTTATGGGCCCACATTTTGTGCAACTTGATTTACCTGAGCCACAGAATGGGCACTCTCAAGCTGTATCTTCAGTGGGTCAGTCTCCGGTAACACAACCTGCAATCGCTAGCCAGAGTACTTTAGCGTTATCCCCACCGCTGTTTCCTTATTTCAGACCATATCCAAACTACATCCCTTATAACCCGTATTTCCCGCATATGTATTTGCCGCCAAATGCCCATTTGTTGACCCACGGTGTCTTCCCTCAGCCATCACTGCCACCAACTGCTGTCAATGTCCATCATATGGCGGCAACAGCAGGGCTGACGATACCTACTCCTTCACAGAACAAACAAGGAAGTAACGAAGATAATACCGCATCTGAAACAAAAGATAACACTATTCTTTCAACGGTTCAACAGGTTGAAGATACACAAGCTCGGGCTCAAGCACCTCTCGATTTACCAAATATACTGCCAAATTATTTCTACGGCTTCCCACATGGACAACACATGGCGGCCTTTTCGCCTTTACAAGCTGCTGCGCTTTATCATTCTTCACAGACCATGACCGCTCAATCTACCATACAACCGCCATTCATGTATCAACAACCACCACCTACTGGCGGTACGATTGAACACTCTCAACATCAGCATGCACCACAGATAAACCATAACGACACCGCATTAGTGAACACGGGGACTGGTTGA 2118 44.95 MSSGEARVSIPHNARKLIQQVTKTLTHNHTDAFVYSTLIDSAMDPAEATRRLKMIHDIREIAGKHSVEDVYTMLKECNLDANEAAQRLLYIDTFHVVKKKHDRRKIISSDVSQENKQTRGNQWRGDKGGRGTFYASKVFEDVGGGRNLSSGKEYGATNRVEKVLKPAVPGHMGKENNIVHVSNSCANVNGTPALSNGNYNHKLASVSPADIASPTSDHVVVSSQNTKHMCAVGTIKCEIVKRSGSNESNARIPAGKKFTADQSGTGTISIIAEAVDSDRKSNVAEKNQISDSSQPLLSSTQNSGQVVNSIQDNQQHPQSLKEPLNDLVPEEESELTISASKLDVMLEKLTLSSHQAVIFPDHIQVPEKYKSQFVFGTLDVTIDDCKPISVTESTQQNEVVKEPSLSNGNASAIAQEGEVQDHVSEDVSCLEDNIAPESSAPTHEQTVEIVPPPPSTGFQNIPVLQTTRDYYGYMPPLMGPHFVQLDLPEPQNGHSQAVSSVGQSPVTQPAIASQSTLALSPPLFPYFRPYPNYIPYNPYFPHMYLPPNAHLLTHGVFPQPSLPPTAVNVHHMAATAGLTIPTPSQNKQGSNEDNTASETKDNTILSTVQQVEDTQARAQAPLDLPNILPNYFYGFPHGQHMAAFSPLQAAALYHSSQTMTAQSTIQPPFMYQQPPPTGGTIEHSQHQHAPQINHNDTALVNTGTG 705
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g01362 705 MobiDBLite consensus disorder prediction 579 602 - -
Hean11g01362 705 PANTHER FLOCCULATION PROTEIN (DUF1296) 491 594 IPR044277 GO:0051082(PANTHER)
Hean11g01362 705 MobiDBLite consensus disorder prediction 436 459 - -
Hean11g01362 705 Pfam GBF-interacting protein 1 N-terminal 53 105 IPR009719 -
Hean11g01362 705 Pfam GBF-interacting protein 1 N-terminal 10 52 IPR009719 -
Hean11g01362 705 SUPERFAMILY UBA-like 53 105 IPR009060 GO:0005515(InterPro)
Hean11g01362 705 MobiDBLite consensus disorder prediction 279 306 - -
Hean11g01362 705 MobiDBLite consensus disorder prediction 667 705 - -
Hean11g01362 705 MobiDBLite consensus disorder prediction 677 705 - -
Hean11g01362 705 MobiDBLite consensus disorder prediction 286 306 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g01362 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:39064347 Hean7g03170 Hean-Chr7:147772522 dispersed