AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g01364 ATGAGTGTGAGTGTGAGTAATCGTGGTGAGAGATCAATGGAAGAATCACACGAGATATTATTAAACTCACTTTCAAAAGCCGGAGTTCCGATCCCGCCGGAAGTTTCCTCCGTTCAAGATCTAACACCGGAAGCTTTAGTATCGATCTGTGCTCATTCGCTTCGTATAATTTCAAACTCGGATTCATTTCCGATCACTTTACCGGAATCTATGGCCGATCGGTTCACTGTATGCACCGATCTCGCTTCATCTGTTAAAGACCTAGGTTACATCGGCGATATGAGCTTTCATAAGTTCCTGTATCCATCTGAAGAAGACATGTATAAGCTGATTAGATTTTTGGTTGGGAGGCTCTCTGAATCGTCTCGAACTGCAGTATCACCCGAAACAGAGGACGATAATGCCACTACAACAACACATGTTGATATTCTGGAAAGATCCGTTAACGATGCTGATGATAGACAGGATTTGCACACTAAAGTTGAAGACCTGAAACTGAGAACCGATGATGTGGCATCACATACAATTCAGTATGCTGAAGATGTTGTGACTGAAAATGGTAATAGAAGAGAGGATTCAGATACCAATAATGCCATATTAATAGAGGATGCTCGGTGTTCTAGAAACTCTGTCGGTGGTAAGGTCGAGGTTATATCTCAGGAAGATGGTCAACATAAACGTGAGCGGTCAATGTCGCCTCTTCAAGACAAATCATCCCAGGAAAGTGTACGGACGAGTGACAAGACAGAAATTTTAATAAATCAAGAAAATGTGTTTACAGATGAAATGAAGGCAAAATCATTGATGCTACAACAATTGGAAGAGCAACATGATATGTTGAAAGCAGCAATGGAAATGGCTTGTGATGAACATACCCCTTTGGAGTCCTACATAACACAGCTCAGTAAGCAAATAGATGCAAAGAAACATAATATAGCAGAAATGGAGTCAAAATGGGAAACAATCATAAAGCCTTTAAAAGACGAGAAAAGAAATTTTGAAGAAGATCTATGTGCAAAACAACCCGAGTCTCAAGAAAAACATCAACAGTGGAAAAAACTCGAGCAGGACTTAGAGTCCACATTGTCTGAAACAAATCAAAGAGAAAAGGAACTTTTGAATTTGAAAGAAGAAATTGAGAAACTACCGAAGTCGGCATCAAGAAGATCCTACATTGAGCGGATAAAAGAGATTACTAAAAACAGCCGAAAACAAGACATTGACATAGAACGTATTTTGAAAGATACCCGAGATCTTCAACTGGAGAGCAACATGATTCAAGAACGCCTGCATCGAACTTACGCTGTGGTAGATGAAACACTTCTAAGGGAAGCAAAGAAGGACCAGGTAGGAGAACAAGCGCACATTTTGCTGACAACCATCCATGAGAGTTTTCAAGAAATTTCAGAGAAGATCCTTGCAGCTGACAGAACGCGTAGAGAAGAAACGGATCTCGAAACTAAGCTTTCAAGTATTGCTACCCGAAGTTTAAACATGGACAAACTACAAGTGGATCTTGATGCCATCAGGAAAGAAAATGAATACCTTGAATCTCGTTTGGGTAATCCTTAA 1572 40.14 MSVSVSNRGERSMEESHEILLNSLSKAGVPIPPEVSSVQDLTPEALVSICAHSLRIISNSDSFPITLPESMADRFTVCTDLASSVKDLGYIGDMSFHKFLYPSEEDMYKLIRFLVGRLSESSRTAVSPETEDDNATTTTHVDILERSVNDADDRQDLHTKVEDLKLRTDDVASHTIQYAEDVVTENGNRREDSDTNNAILIEDARCSRNSVGGKVEVISQEDGQHKRERSMSPLQDKSSQESVRTSDKTEILINQENVFTDEMKAKSLMLQQLEEQHDMLKAAMEMACDEHTPLESYITQLSKQIDAKKHNIAEMESKWETIIKPLKDEKRNFEEDLCAKQPESQEKHQQWKKLEQDLESTLSETNQREKELLNLKEEIEKLPKSASRRSYIERIKEITKNSRKQDIDIERILKDTRDLQLESNMIQERLHRTYAVVDETLLREAKKDQVGEQAHILLTTIHESFQEISEKILAADRTRREETDLETKLSSIATRSLNMDKLQVDLDAIRKENEYLESRLGNP 523
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g01364 523 Coils Coil 358 382 - -
Hean11g01364 523 PANTHER JM1 PROTEIN 168 521 IPR008530 GO:0097602(PANTHER)|GO:2000060(PANTHER)
Hean11g01364 523 Pfam CCDC22 protein N-terminal domain 13 119 IPR048349 -
Hean11g01364 523 MobiDBLite consensus disorder prediction 217 246 - -
Hean11g01364 523 Pfam CCDC22 protein coiled-coil region 115 494 IPR048348 -
Hean11g01364 523 Coils Coil 298 318 - -
Hean11g01364 523 Coils Coil 499 519 - -
Hean11g01364 523 MobiDBLite consensus disorder prediction 219 234 - -
Hean11g01364 523 Coils Coil 263 290 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g01364 K23343 coiled-coil domain-containing protein 22