AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g01484 ATGACACCACCAAATGCGAACATGGACACCGCTAAACACCAATTCTTGCAGGAATTCGGTGATTCCTACGGTTATCCAAACGCCCCCAACAATATTGATCATATTAGGGCTACTCAATTCAAAAGACTTGATGGGAGTGTGTACTTGGATCATGCTGGTGCAACTTTGTATTCTGAGTTACAGATGGAAGCCATTTTTAAAGATCTTTCCACCACTGTATATGGCAATCCCCATAGTCAAAGCAACTCTAGCTTGGCCACCTCAGACATTATAGAAGATGCCCGTCATCAGGTTCTCAAGCTGTGTAACGCGTCTCCAAAAGAATATAAATGCATATTCACTTCAGGGGCAACAGCAGCTCTTAAACTTGTTGGTGAGGCTTTTCCTTGGAGTGATCATAGCACTTTTATGTATACAATTGAGAACCACAACAGTGTTCTTGGGATTAGAGAATATGCTCTCAATAAAGGAGCCGCAGCATTAGCAATAGACTTTAAGGAAGCTGCAGAGTCATCTGTTATAAAGGTTTCACATCATCCTATACAAAAGAGAAGTGAAGCTACGGTTTTGGACAAACAACCGACTGGTGAAATATACAATTTATTTGCTTTCCCTTCCGAGTGTAATTTCTCAGGAGTGAGGTTTAACCTCGATTTGATAAACATAGTTAAGGAAGATTCAGAGAAAGTATTGGACGGTTCGCAACATTGCAGGGGAAACTGGATGGTTTTGCTTGATGCTGCAAAAGGGTGTTCTACAGACCCTCCGGATTTATCAACATATAAGGCGGATTTTGTTGTTATATCGTTTTACAAGCTTTTTGGATATCCAACTGGACTTGGAGCTTTGCTAGCTCGAAATGAAGCTGCAAAGTTACTAAAGAAGAGCTACTTTAGTGGAGGCACAGTGGCTGCATCAATTGCTGACATCGACTTTGTGAAAAGAAGAGAAGGTATTGAAGAATCATTCGAAGATGGAACGCTGTCCTTCTTGAGTATTGCAGCCATTCGCCATGGATTTGATATTCTAAATACGTTGACTCCATTATCCATATCAAGGCATACATCATCACTTGCAAGGTATACAAGAAATACGCTTTTGGCATTAAGGCATGCGAATGGGCAAGAGGCTTGCGTAATATATGGGCTGGAATGTTTAAAGGCAGCTTACAGCGGACTTGGACCTATAGTTTCTTTCAACTTGAAACGGGCTGATGGTTCTTGGGTTGGCCCTCGTGAAGTCGAAAAATTGGCTTCTTTATCTGGAATTCAGCTACGGACAGGATGCTTTTGCAATCCCGGCGCTTGTTCCAAGTATCTTGGTTTATCACATGCAGATCTTCTATCCAACATTGAGGCAGGACATGTTTGCTGGGATGACCTTGATATATTACATGGAAAACCAACCGGAGCTGTTAGAGTGTCGTTTGGTTATATGTCAACATTTGAAGATGCATGGAGATTCATGAACTTCATTGTAACTTCCTTCGTCTTGTTACCTAGCAGTACATTGAAGTCCAGATCTATCCAGTCTACAAATGAAGGTGGCAAGACGACACCAGAACGTTATCTTACATCAATTGTTGTGTATCCAATAAAATCATGTGCAGGATTCAAAGTGGACAGCTGGCCTCTAAGCAGCACTGGATTGTTATATGATCGAGAATGGCTTCTCAAAAGCATGAATGGTGAGATTCTTACACAGAAGAAGGCACCTGAAATGAACTTTATCGCTACAAAGATTGACCTCAAAACAGGAATACTTTATGTGGAATCTCCTCGGTGCAAAGAGAAGCTACTTATCGAACTTAAATCAAATTTATCTGCCGCTGTAGAAGAAATCAACGTACATGCCCAAAGATATGAAGTTATCGGCTACGATAACAAGATCGACACATGGTTTAGTAACGCGGTTGGCCGGCCTTGTTATTTGTTAAGATCTAGTTCCAGAAGCTGTACCCGTTTGAACAGAAACCAAAACCCGAGCATATGCAGAGACATAAAGACCAGATTGAACTTCGTTAATGAAGCTCAGCTTTTATTGATATCCGAGGAAAGCGTATCTGACCTCAACCAGAGATTAAATTCAAAAGAAGAGTCTGTTGAATCACCTATGGAAGTCGATGCAATGAGATTCCGGCCCAATCTTGTAATATCTGGTGGAGCGCCATATGTTGAAGACAGTTGGAGTGGTCTTAAGATTGGAAAACATCACTTCACCTCGTTAGGCGGCTGCAATCGTTGCCAGATGATCAATTTGAATTATCGAGCTGGTGAGGTAGAGAGATCAAACGAGCCTCTAGCTACTTTAGCTGCTTACAGGAGGACAAAGGGGAAAATATTGTTTGGAATTTTACTGAGATATGAGCGCGACAATGAGACCGAGGAGGAAACATCTTGGGTTCATGTGGGACAGGAAATATACCCTGATGCATGA 2436 41.67 MTPPNANMDTAKHQFLQEFGDSYGYPNAPNNIDHIRATQFKRLDGSVYLDHAGATLYSELQMEAIFKDLSTTVYGNPHSQSNSSLATSDIIEDARHQVLKLCNASPKEYKCIFTSGATAALKLVGEAFPWSDHSTFMYTIENHNSVLGIREYALNKGAAALAIDFKEAAESSVIKVSHHPIQKRSEATVLDKQPTGEIYNLFAFPSECNFSGVRFNLDLINIVKEDSEKVLDGSQHCRGNWMVLLDAAKGCSTDPPDLSTYKADFVVISFYKLFGYPTGLGALLARNEAAKLLKKSYFSGGTVAASIADIDFVKRREGIEESFEDGTLSFLSIAAIRHGFDILNTLTPLSISRHTSSLARYTRNTLLALRHANGQEACVIYGLECLKAAYSGLGPIVSFNLKRADGSWVGPREVEKLASLSGIQLRTGCFCNPGACSKYLGLSHADLLSNIEAGHVCWDDLDILHGKPTGAVRVSFGYMSTFEDAWRFMNFIVTSFVLLPSSTLKSRSIQSTNEGGKTTPERYLTSIVVYPIKSCAGFKVDSWPLSSTGLLYDREWLLKSMNGEILTQKKAPEMNFIATKIDLKTGILYVESPRCKEKLLIELKSNLSAAVEEINVHAQRYEVIGYDNKIDTWFSNAVGRPCYLLRSSSRSCTRLNRNQNPSICRDIKTRLNFVNEAQLLLISEESVSDLNQRLNSKEESVESPMEVDAMRFRPNLVISGGAPYVEDSWSGLKIGKHHFTSLGGCNRCQMINLNYRAGEVERSNEPLATLAAYRRTKGKILFGILLRYERDNETEEETSWVHVGQEIYPDA 811
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g01484 811 SUPERFAMILY PLP-dependent transferases 32 492 IPR015424 -
Hean11g01484 811 Gene3D - 62 342 IPR015421 -
Hean11g01484 811 Gene3D Aspartate Aminotransferase, domain 1 343 493 IPR015422 -
Hean11g01484 811 Pfam Aminotransferase class-V 47 163 IPR000192 -
Hean11g01484 811 Pfam Aminotransferase class-V 240 485 IPR000192 -
Hean11g01484 811 SUPERFAMILY PK beta-barrel domain-like 525 774 IPR011037 -
Hean11g01484 811 ProSiteProfiles MOSC domain profile. 650 810 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Hean11g01484 811 Hamap Molybdenum cofactor sulfurase [MOCOS]. 22 809 IPR028886 GO:0006777(InterPro)|GO:0008265(InterPro)
Hean11g01484 811 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 10 497 - -
Hean11g01484 811 Pfam MOSC domain 669 807 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Hean11g01484 811 SUPERFAMILY MOSC N-terminal domain-like 524 656 - -
Hean11g01484 811 Pfam MOSC N-terminal beta barrel domain 523 641 IPR005303 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g01484 K15631 molybdenum cofactor sulfurtransferase [EC:2.8.1.9]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:44667224 Hean13g02182 Hean-Chr13:96504467 dispersed
Hean Hean-Chr11:44667224 Hean15g03633 Hean-Chr15:129759809 transposed