AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g01620 ATGGGTTGCAGAAATCCAAAAGAGAAAGAAGAAGAAAGATCGCGAGAATCAAGAACAAACAAATGGGTTGTAAACGATGCTTTGGTGTTAACAACCATGTGTCTCATTGGTCTCTCTGTCGATGTTCACATCAACGATGGCTCTGTTTATTCTGGAATCTTCCACACTGCCTCTCTTCATCATCATCATCATTATGCTATAGTGTTGAAACGAGCAAAGATGACGAAAAAGGGGAGATGTAATTCAAATGTGACCAATAAGGATGTAATAGGAACACTTGTAATCCAGTCAGATGATCTTGTTCAAATAGTTGCAAAGAAAGTAGTAATTCCAGCAGATGTTTTTGCCGGTCATGAAGCTGGTGATGATACAGCGGCTGTTGCAACCTCCTTTCCTTCTAACGGAATTTCATTCACAGAATCGAATAAAACGACTAGCAAGTCAAATGCTGGTCAACCACATACTAATCAATCGAGAAAGAATGGTGGTCAGACTAGTTCATCAGAACAGTTAGTCACTTCATCAGCACCGAATGAAACCGTCACTACAAAAATCCCGAAGTCTAATCCAACCGTTAAGGAGTTTAAACTTAACCCTGGAGCAAAAACATTTTCTCCATCATTTCCAAATAAGAAATCACCAACCCCTCCAACGATAGCTACGGGTGCAAATCTTGCATACATTCCCGACAGTTATCCTGGTGGCCCTGTTGTCAGGTCACAGCCCGAAGTTGAAATCAGCCCATTTGCTTCCCATACTCCGCCCGTTAAGTATGTTCCATATGGAGGCAATGACGTACAACATCTTCCCCCTATTGTTGGATATATGACAAACAGGAGTCAAGCGGTTAGATATGGTGTCCCGTATCATCCAGTTCAAACAGCGCCGACTTATGTCCAACCAAGCTCTCAGAATGCAATGGTTGGAAGATTGGGACCCGTTGTCTATGTTCATCCTGTTTCTCAAGTCCCGAACACGAATAGCTTCTCCTCCATTTTAACTCCACACCAAGTACATGTCCCGAAACACCAAGGAACCGTGGCGGCTCAAGCATTGCAGCTACATGTGGCTCCACCGCTTATAGGTGGTGGTCAACCGCCCTTTGTTTTGCCAAGCCATATTCCGGTATCACACCCGACTTACCCCGTGATGCGACCTATCTCGGTCCCTGGATCTAGTGGCTTTTTAGTATCAAAGTTTTCTTGA 1206 43.86 MGCRNPKEKEEERSRESRTNKWVVNDALVLTTMCLIGLSVDVHINDGSVYSGIFHTASLHHHHHYAIVLKRAKMTKKGRCNSNVTNKDVIGTLVIQSDDLVQIVAKKVVIPADVFAGHEAGDDTAAVATSFPSNGISFTESNKTTSKSNAGQPHTNQSRKNGGQTSSSEQLVTSSAPNETVTTKIPKSNPTVKEFKLNPGAKTFSPSFPNKKSPTPPTIATGANLAYIPDSYPGGPVVRSQPEVEISPFASHTPPVKYVPYGGNDVQHLPPIVGYMTNRSQAVRYGVPYHPVQTAPTYVQPSSQNAMVGRLGPVVYVHPVSQVPNTNSFSSILTPHQVHVPKHQGTVAAQALQLHVAPPLIGGGQPPFVLPSHIPVSHPTYPVMRPISVPGSSGFLVSKFS 401
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g01620 401 MobiDBLite consensus disorder prediction 138 189 - -
Hean11g01620 401 Pfam Ataxin 2 SM domain 25 106 IPR025852 -
Hean11g01620 401 PANTHER ATAXIN 2-RELATED 133 375 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Hean11g01620 401 MobiDBLite consensus disorder prediction 138 217 - -
Hean11g01620 401 MobiDBLite consensus disorder prediction 203 217 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g01620 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402187 Hean11g01620 Hean15g04051
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3206831 Hean Hean11g01620 Hean-Chr11:49252851 Hean12g00730 Hean-Chr12:14125495
3282935 Hean Hean11g01620 Hean-Chr11:49252851 Hean15g04051 Hean-Chr15:159109578