AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g02566 ATGGCTTCTGTTGCTCACCTTCATCACTCAGGAAACAACCTTCGTCATTTGCGTATTCCTGGCCTCCAGTTACCAACCCTTACCTGCAAAAACCTTGTCGGTTTGCCTCTCCGATTTAAGCCAATTGATATACTATCTATTCGACAACCGATTCCCTGTACTGGCGGTGGAGGTGGTAGTGCTGGTGTTGGGAATGGAAGCGGTGGCGGTGGCGGAGGAGGAGGTAATGGTGGTGATAGTCGCCCGGACGAAGGGGGGAAATTCGACGATAATTCATCGGTAGACAGTTTCGGGCCATTTGGGGCTTTACTTGGTGGTTGGAGATCAAGGGTTGCTGCTGATCCCCAATTTGCATTCAAGGTGTTAATGGAGGAAGTTGTGGGTGTGAGTGCAACCGTGTTTGGCGACATGGCAACGCGTCCAAATTTCGGTCTAAACGAGCTTGATTTCGTGTTTTCGACACTAGTAGTAGGATCAATCTTGAATTTCACCCTTATGTATCTATTAGCACCCACCATGTCATCTGGATCAACAACCCTCCCTTTCATATTCGCCAATTCGCCAACAAGCCACATGTTTGAGCCCGGTGCATACAGTGCGGTGAACCGGCTAGGGACATTTGTGTACAAAGGAATATTGTTTGCAGCAGTGGGGTTTGCTGCTGGTTTAGTTGGGACCACCTTGTCCAATGGGTTGATCAAAATAAGGAAGAAAATGGACCCCGGGTTCGAGTCACCTAACAAGGCTCCACCTACTGTATTGAATGCGGTCACATGGGCGATTCATATGGGTTTAAGTGCTAATTTAAGGTACCAAAGCCTGAATGGGATCGAGTTTTTGTTGGCGAAGGGGTTGCCGCCGTTGTTGTTTAAGAGCTCCGTGTTCGGGTTGAGACTGGCGAATAACGTTCTTGGTGGAATGACTTTTGTGATGTTGGCAAGGGTGACCGGATCGCAAAGCGCTGCTAGTGGTGAACACAAGGTTGCCGATGAATAG 996 48.8 MASVAHLHHSGNNLRHLRIPGLQLPTLTCKNLVGLPLRFKPIDILSIRQPIPCTGGGGGSAGVGNGSGGGGGGGGNGGDSRPDEGGKFDDNSSVDSFGPFGALLGGWRSRVAADPQFAFKVLMEEVVGVSATVFGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMSSGSTTLPFIFANSPTSHMFEPGAYSAVNRLGTFVYKGILFAAVGFAAGLVGTTLSNGLIKIRKKMDPGFESPNKAPPTVLNAVTWAIHMGLSANLRYQSLNGIEFLLAKGLPPLLFKSSVFGLRLANNVLGGMTFVMLARVTGSQSAASGEHKVADE 331
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g02566 331 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 46 321 - -
Hean11g02566 331 MobiDBLite consensus disorder prediction 58 91 - -
Hean11g02566 331 Pfam Protein RETICULATA-related 110 277 IPR021825 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g02566 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
101191 Hean11g02566 Hean6g00045
402272 Hean11g02566 Hean1g00042
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3207551 Hean Hean11g02566 Hean-Chr11:114034058 Hean6g02528 Hean-Chr6:82165830
3265238 Hean Hean14g02042 Hean-Chr14:115534194 Hean11g02566 Hean-Chr11:114034058
3265486 Hean Hean14g03068 Hean-Chr14:146136606 Hean11g02566 Hean-Chr11:114034058
3265548 Hean Hean14g03366 Hean-Chr14:154961183 Hean11g02566 Hean-Chr11:114034058
3267687 Hean Hean16g03026 Hean-Chr16:150954325 Hean11g02566 Hean-Chr11:114034058
3276234 Hean Hean7g01618 Hean-Chr7:106959742 Hean11g02566 Hean-Chr11:114034058
3280479 Hean Hean1g00042 Hean-Chr1:1365781 Hean11g02566 Hean-Chr11:114034058