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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g02582 ATGGCAGCCATAAATCACATTTCAACCAAACATTTCCTTTTGCTGGTGCTGATCCTTTTCATCTGCAAATCAAGTTCAGGAGTAAACATGAGTGAAGATGTGATGCCACTGCCAGTGCCAGTGCAGGTGCCATTGGGGAGGAGCGAATACGCAATGTTGGCGGGGAGGAGGAGGCTTAGTCCATTTCAGACATGCTCTACCTGCAAGTGCTGTCGCGTGCCTTCCGATCCGACAACATGCTCAGACATGCCTTGCTGTTATAAAATAAATTGCAATATTCCAAACAAACCCTTTGGCACTTGTGCTTTTGTCCCCACGAGCTGCAACTGTAACAATTGTGCTTCTTCTTAA 351 46.44 MAAINHISTKHFLLLVLILFICKSSSGVNMSEDVMPLPVPVQVPLGRSEYAMLAGRRRLSPFQTCSTCKCCRVPSDPTTCSDMPCCYKINCNIPNKPFGTCAFVPTSCNCNNCASS 116
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g02582 116 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12 114 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g02582 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402278 Hean11g02582 Hean1g00061
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3207563 Hean Hean11g02582 Hean-Chr11:114899881 Hean1g00061 Hean-Chr1:1695568
3250807 Hean Hean11g02580 Hean-Chr11:114764434 Hean11g02582 Hean-Chr11:114899881
3256061 Hean Hean11g02582 Hean-Chr11:114899881 Hean11g02583 Hean-Chr11:114903859