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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g02595 ATGCATATTACTAAAACAAGATCAAGATCCCAAGTAGTGAGCCGTAGGGCTTGGCAGATACTACGGTTAGCATTGTTATGGGCTAGAAAAGGTGGAGTCTTTGTGGTGAAGAAAAAGCTCTTGCATGATTTATCTCATTTTGTCAAGAGCCATGGTCATTCTAAAAAAGGCAATGGTGCACTCCAATATGGTGACAGGCAGCTGTCATTTGATGCCACTCCTATCATCCATGTTGGGATGCACCGCCCCAACTCGATGCGCTTCCGCTTGCCTCACATCCCCTGCATTAACCCGCACGTTGATTGTTCGGATATGTTTGAGTTTGATGATGATAGTGTCCGGTACTCATGTTGTGAAGCAAGAAAGAGTTTCTTGATTGGTAATGGTGAAGAGTATAATGAAGAAGATGATGATGATGAATATGACCAAATGTGTGAGGAACAAGAAATGGGAATTGATGTAAAGGCTGAGGAGTTTATAGCCAACTTCTATGAGCAGCTTAAGCTTCAAAGGCAACTCAACACAAAAAGAATCCACTAA 540 42.22 MHITKTRSRSQVVSRRAWQILRLALLWARKGGVFVVKKKLLHDLSHFVKSHGHSKKGNGALQYGDRQLSFDATPIIHVGMHRPNSMRFRLPHIPCINPHVDCSDMFEFDDDSVRYSCCEARKSFLIGNGEEYNEEDDDDEYDQMCEEQEMGIDVKAEEFIANFYEQLKLQRQLNTKRIH 179
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g02595 179 PANTHER AVR9-CF-9 RAPIDLY ELICITED PROTEIN-RELATED 11 174 - -
Hean11g02595 179 Pfam Cotton fibre expressed protein 151 175 IPR008480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g02595 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402282 Hean11g02595 Hean1g00081
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3207575 Hean Hean11g02595 Hean-Chr11:116306835 Hean1g00081 Hean-Chr1:1926943
3250808 Hean Hean11g02595 Hean-Chr11:116306835 Hean11g02597 Hean-Chr11:116312035
3256062 Hean Hean11g02594 Hean-Chr11:116067711 Hean11g02595 Hean-Chr11:116306835