AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g02689 ATGTTCAACCTTTTCAACATAAAACTCCGGCGACTCTTCCGGTGGCCGGTGCGCCGCCGTACAAAGCCCAAAATCACCATCAAAAGGCTTAAAAAGTCAAACTTTATGGGTCAAGATTCATCAAATCCAAATGGGTCAGCCACAATTCACCCAAATAACCAAACAGGTGTCTCAAAATCCGAAACCCCAATTCGAATTGCAACTTTTAATGCAGCTTTGTTCTCCATGGCACCAGCAGTTCCAGAGTTGACCAAAAAAGGTTCAAGCTTTGACCTTTTTGAAGATGATCAAGATTACACAAAGGTAGCCTCTGATTATTCAGTTTCTTGCTCTAATATAAAGTCAAAATCAATGGTTGATAGGCCCAAAAGTATATTAAAACAATCACCATTGCATTCAAGTTCAGTTAGTAGTAGTTCAGAAAGTTTGTTAAAAGAGTCAAAACAGCAGAAGTTTGCAAAGTCAAAGCTGAGGGTGTCTATTAATTTACCCGATAACGAAATCTCGTTAAGGCGAAGTGGGCAGTTGAGCTTTGTTAGAGATGAAACCGAAACCAACCCGAGTTTGAAAACTAGTGGTTCTAGAGGTATAAGCAAGGTTTTGAAAGGAAAGGGTGTTTTGAGGTCAAACAACAGTTTTTGTTCAAGGGAGTTAGAAAGTCAAAGGGGGGAGTGTCGGTCCACGAAGACGGTTCTTGAGGTTTTGAGAGAATTGGATGCAGATATATTGGCTTTACAGGATGTGAAAGCTGAAGAAGAAAAGGATATGAAGCCATTGTCTGATTTGGCTGCTGCTTTGGGTATGCATTATGTTTTTGCTGAGAGTTGGGCACCGGAATTTGGTAATGCGGTTTTGTCGAAATGGCCGATTAAACGATCCAAGGTTCAGAAGATTTTTGATGATTCTGATTTCAGGAATGTTTTAAAGGCGACAATTGATGTCCCCCAAACTGGAGAAGTTGATTTTCATTGCACCCTTCTTGATCATCTTGACGAGAATTGGCGAATGAAACAAATAAACGCAATAATCGAGTCTAATGAGAGACCACACATCTTAGCCGGAGGTATCAACTCTCTTGACGAAACAGACTACTCCCCCGAAAGATGGACCGACATTGTTAAGTACTATGAAGAAATGGGAAAACCGACACCAAAAGTTGAAGTGATGAAGTACTTAAAGAACAAACAGTACACCGATGCCAAGGATTGCGCAGGCGAATGCGAATCTGTAGTCATTATCGCCAAAGGCCAAAACGTGCAGGGTACGTGCAAATATGGTACTAGGGTAGATTACATATTGGTGTCGCCTGATTCTCCCTACAAGTTTGTTCCGGGTTCATATATGGTTTTATCATCAAAAGGTACTTCTGACCACCATATCGTCAAAGTTGATGTAACGAGGGCAGACGATTCTGGTCAACCACCGTGTGTTAGGAGTCATCGACATCCTAAACAAAAAGTTGTAAAGATCATGGATTCTAATTCAACAAAAGGGGTGTGGAAAATGCAAACTTTAGACCGGTAG 1524 41.14 MFNLFNIKLRRLFRWPVRRRTKPKITIKRLKKSNFMGQDSSNPNGSATIHPNNQTGVSKSETPIRIATFNAALFSMAPAVPELTKKGSSFDLFEDDQDYTKVASDYSVSCSNIKSKSMVDRPKSILKQSPLHSSSVSSSSESLLKESKQQKFAKSKLRVSINLPDNEISLRRSGQLSFVRDETETNPSLKTSGSRGISKVLKGKGVLRSNNSFCSRELESQRGECRSTKTVLEVLRELDADILALQDVKAEEEKDMKPLSDLAAALGMHYVFAESWAPEFGNAVLSKWPIKRSKVQKIFDDSDFRNVLKATIDVPQTGEVDFHCTLLDHLDENWRMKQINAIIESNERPHILAGGINSLDETDYSPERWTDIVKYYEEMGKPTPKVEVMKYLKNKQYTDAKDCAGECESVVIIAKGQNVQGTCKYGTRVDYILVSPDSPYKFVPGSYMVLSSKGTSDHHIVKVDVTRADDSGQPPCVRSHRHPKQKVVKIMDSNSTKGVWKMQTLDR 507
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g02689 507 FunFam Endonuclease-exonuclease-phosphatase family protein 216 468 - -
Hean11g02689 507 Coils Coil 235 255 - -
Hean11g02689 507 Gene3D Endonuclease-exonuclease-phosphatase 213 468 IPR036691 -
Hean11g02689 507 SUPERFAMILY DNase I-like 227 465 IPR036691 -
Hean11g02689 507 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 46 464 IPR051916 GO:0005783(PANTHER)|GO:0006506(PANTHER)
Hean11g02689 507 MobiDBLite consensus disorder prediction 35 59 - -
Hean11g02689 507 Pfam Endonuclease-Exonuclease-phosphatase family 223 458 IPR005135 GO:0003824(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g02689 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402295 Hean11g02689 Hean1g00258
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:123447515 Hean3g02970 Hean-Chr3:148639024 dispersed
Hean Hean-Chr1:6688653 Hean11g02689 Hean-Chr11:123447515 wgd