AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g02972 ATGGGGGAAACCAAGGAGAACAAGTTGAAGCCACCGTCGAAGTTTTCGGATGAGAATCAAGCGCCGTTAAAGCCTAGAAACAGCAATGTGCAGTCGAATTTGAAGCCCAGATCGATTTGGGGTTCCAACATTGTGAAAGGGTTTTCAGCTGATAAGAAAACCAGATCGCAACAAGTTGGTAAGAAATCGCAACAACAACCGCTTACTACAGTCTCCAACACGAATTCGAAAAACCCTTTTGCTCAGAATCGAACAAAACGGTCACTTATCGGAGATTTATCCTGTTCTGTCACTGCTACACAAGTTCATCCACAAGGGCTGTATAAATCATCGTCTTCATCAGGTTCTCGTGATCTGTTTGCCGAGCTTGATCAGCTCAGAAGCTTGCTTCAAGAATCTAAAGACAGAGAAGCCAAACTGCAGGCTGAGTTAGGTGATTTCAAGAAGAAAAACCTCAAGGCTTTGGAGCTCGAACAAGCGGTTGAATCGAAGACTAGTGAAATAGAAACTCTCAAAAGCAAAATCGATTTGCTCGAATCGGAAAACGCCAGTCTTTCTGAGCAGTTGAATTCCCAGCAGTTGCAAGAAAATATAGCAAAGGGGGTTGTTAATGGTGTTGAGGTAGATGTTCTTAAGTTGAGAAGGCTGAATGCTGAGCTTCATCTTCAAAAGAGAAATCTTTGTTTCAGAATCTCTTCAATGGAGTCAGAACTAGCTGCCATAGCCAAAGATTCTGAGAATGAATTCGTTCAGAAGATCAAAGCGGAGGCATCTATGTTACGACAAACAAACGAAGATTTATGTAAACAAGTTGAAGATCTACAAGTAAGTCGATTAAACGAGGTTGAGGAGCTTGTCTATCTTAGATGGGTCAACACCTGTCTTAAAAACGAGTTGCAAAATTCGACGTTTGTAAGTTCCGAAGTAACATCAAGTCCAGCTTCCGTTGAATGGCTCAACGGTTCCGTATCAAGTGACGGAAGTTCCGAACACGGTAGTACCCAAAAAACGTTAAGTTTGATTAAGAAAATGAAAAAATGGCCCGTTCTTGATGAAGAAACGAATGTCTCGGAACCGATTAACTCTAAACTGAATCTCGGTTGGTCAGACGGAAGACGACATTCAATCAGTGGAGCTAATTGCTGTCAAGAAGATCTTGTAGTGAATAAACGAAGACAATCTGACGGTTTTATATGTATAACGGAAACGGATGGTGTAAATGATTTGAATGTGATCCAAGGGTCACAATTGCGTGAAGCTACGAAACTGAAAACGTTTTTGGACGTTGAAAAACGGGCGTTGCGTGTTCCTAACCCTCCTCCGAGACCGTCTAGCTTTACTTCTAAGGAACATACGGAGGTTAGTAATCAAGTACCACCGCCACCACCACCACCACCACCGCCGCCGCCGCCTCCACCGCCACCACCTCCGAAGTTCACGGGGAGAAACAACGGTGGAGGGGTTGTTCAACGAGCTCCGGAAGTGGTTGAGTTTTATCATTCGCTTATGAAAAGGGACTCCAGGAAAGATCCGTTAAATGATGGGATCTGTGATGCGCTAGATGTGAATAATGTTCGAAATAGTATGATTGGTGAAATCGAAAACCGATCGTCACATTTGCTTGCTATAAAGGAGGATGTTGAGACTCAAGGGGAATTCGTGAATTCGTTAATACGGGAGGTCAACAATGCGGTTTATCCGGAAATAGAAGATGTGGTGGCTTTTGTGAACTGGCTGGATGATGAACTTGGCTTTCTTGTGGACGAGAGGGCTGTGCTGAAACACTTTGATTGGCCGGAGAAGAAAGCCGACACATTAAGAGAGGCAGCGTTTGCGTATCGAGATCTAAAGAAGCTGGAGCATGAAATTTCAAATTACAAGGACAATTACCACATACCCTGTGACTTGGCGTTGAAGAAAATGGTCTCCTTGTCTGAAAAGATGGAGCGTATCGTTTATAACCTTCTTAGAACGAGAGATACATTGATGCGTAATTGCAAAGAGTTCCATATTCCTACTGATTGGATGCTTGATTCAGGAATATTAAACAAGATTAAGCTGGGATCGGTTAAGTTGGCAAAGAAATACTTAAAAAGAGTTGCTACAGAACTTCAAACGAAGGGAACAACCGAGAAAGATTCTTCAATGGACTATATGCTACTTCAAGGAGTGCGATTTGCTTTCCGCATTCATCAGTTTGCTGGTGGATTTGATGTCGATACAATGCATGCGTTCGAGGAGCTTCGCAACTTGGCTCTTGTTTTGAACAAAAAGTAG 2277 42.91 MGETKENKLKPPSKFSDENQAPLKPRNSNVQSNLKPRSIWGSNIVKGFSADKKTRSQQVGKKSQQQPLTTVSNTNSKNPFAQNRTKRSLIGDLSCSVTATQVHPQGLYKSSSSSGSRDLFAELDQLRSLLQESKDREAKLQAELGDFKKKNLKALELEQAVESKTSEIETLKSKIDLLESENASLSEQLNSQQLQENIAKGVVNGVEVDVLKLRRLNAELHLQKRNLCFRISSMESELAAIAKDSENEFVQKIKAEASMLRQTNEDLCKQVEDLQVSRLNEVEELVYLRWVNTCLKNELQNSTFVSSEVTSSPASVEWLNGSVSSDGSSEHGSTQKTLSLIKKMKKWPVLDEETNVSEPINSKLNLGWSDGRRHSISGANCCQEDLVVNKRRQSDGFICITETDGVNDLNVIQGSQLREATKLKTFLDVEKRALRVPNPPPRPSSFTSKEHTEVSNQVPPPPPPPPPPPPPPPPPPPKFTGRNNGGGVVQRAPEVVEFYHSLMKRDSRKDPLNDGICDALDVNNVRNSMIGEIENRSSHLLAIKEDVETQGEFVNSLIREVNNAVYPEIEDVVAFVNWLDDELGFLVDERAVLKHFDWPEKKADTLREAAFAYRDLKKLEHEISNYKDNYHIPCDLALKKMVSLSEKMERIVYNLLRTRDTLMRNCKEFHIPTDWMLDSGILNKIKLGSVKLAKKYLKRVATELQTKGTTEKDSSMDYMLLQGVRFAFRIHQFAGGFDVDTMHAFEELRNLALVLNKK 758
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g02972 758 MobiDBLite consensus disorder prediction 456 480 - -
Hean11g02972 758 MobiDBLite consensus disorder prediction 20 38 - -
Hean11g02972 758 MobiDBLite consensus disorder prediction 51 81 - -
Hean11g02972 758 MobiDBLite consensus disorder prediction 1 38 - -
Hean11g02972 758 Coils Coil 602 629 - -
Hean11g02972 758 Coils Coil 250 270 - -
Hean11g02972 758 Coils Coil 116 150 - -
Hean11g02972 758 MobiDBLite consensus disorder prediction 434 487 - -
Hean11g02972 758 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 17 750 IPR040265 GO:0009658(PANTHER)|GO:0009707(PANTHER)
Hean11g02972 758 SUPERFAMILY Formin homology 2 domain (FH2 domain) 585 624 - -
Hean11g02972 758 Coils Coil 154 195 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g02972 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402314 Hean11g02972 Hean1g00424
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:140107557 Hean12g01300 Hean-Chr12:30863692 dispersed
Hean Hean-Chr11:140107557 Hean16g02943 Hean-Chr16:147828422 transposed