AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean12g01063 ATGGTTCCTTTGTTCCTCGGGGTTACAATCGGCATACTATCAACTATTGTGAGTAATCAGCGGGAAATTGAGCATCTAAATGAGCTACTGGAACAAGCTGAGAATATGGTTAAAGATTTACACAATAAACTTGAAATGAAAGATGGGTTTGATACCACAAATGAGCATGCTACCGAGTCAGACGTGCCTGCGAACTATAGCCCAGAAGCCAAAAATTTTGAGTTAACAAGTGACATTGAAGCAGAGCTTGAGGCCGAGCTTGAGAGGTTAGAAGAAAATGCACAGAGTTCGTGTAGCGTACCGGAGAATTACTCAGACTTTGAGGCAGACATAGTTATAGGAGACTTGAACCTAGATACGCTCACATGGCAACTCGATAGCCAATCGGAATCCGACCATGATGACAAATGGGTCAAAAGTGAAAGCACTGGGAAGCCCGACCTCACTCCGAATTACACTGTTTCACCCCTTGATTTGCGGTTACGTCTTCATGAAGTAATCGAGTTAGAACTCAGAGCTCGTATCGAGGAGCTTGAGGCAGTTCTTGAGGGAAAAAGTGGTCAAACTCATCCGGACTCTCCAGAACCGGAAGAAGATAACTCTTTCTGGGACTTTGACCACACAAGAATTGAATCTTCTTCTTCAACTCCTTAA 654 43.73 MVPLFLGVTIGILSTIVSNQREIEHLNELLEQAENMVKDLHNKLEMKDGFDTTNEHATESDVPANYSPEAKNFELTSDIEAELEAELERLEENAQSSCSVPENYSDFEADIVIGDLNLDTLTWQLDSQSESDHDDKWVKSESTGKPDLTPNYTVSPLDLRLRLHEVIELELRARIEELEAVLEGKSGQTHPDSPEPEEDNSFWDFDHTRIESSSSTP 217
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean12g01063 217 PANTHER EMB|CAB62613.1 3 184 IPR040348 GO:0008356(InterPro)
Hean12g01063 217 MobiDBLite consensus disorder prediction 182 217 - -
Hean12g01063 217 MobiDBLite consensus disorder prediction 190 206 - -
Hean12g01063 217 Coils Coil 73 100 - -
Hean12g01063 217 MobiDBLite consensus disorder prediction 129 152 - -
Hean12g01063 217 Coils Coil 16 46 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean12g01063 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr12:22918313 Hean9g03996 Hean-Chr9:173900791 dispersed
Hean Hean-Chr12:22918313 Hean12g01064 Hean-Chr12:22923424 tandem
Hean Hean-Chr12:22918313 Hean16g00547 Hean-Chr16:12896395 wgd