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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean12g01075 ATGGCTCTTCTGGAATCAAACAAGAACAGAGGAGAGGTAAGAATTCATGAAAGTTTGGATGAACTCAGCACAGATTTGGCTGATTACATAGCCGAATTATCCGAGGCATCGGTTAAAGAACGCGGTTTTTTCGCCATTGCTTTATCTGGTGGTTCCATCATTACCTTGATGAGGAATCTATGTGGAGCTCCTTATAACAAGACTGTTGATTGGTCCAAATGGTATATATTTTGGGCCGATGAACGCGTCGTTGCCAAGAATCATGCTGATAGCAACTATAAGCTTGCTAAAGATCATCTTTTGTCTAAGTTGCCTATTGTTCCGAGTCATGTACATTCCATCAATGACTCTCTCACAGCCGAAGAAGCTGCTAACGAATACGAGTTTGTGATCAGACAACTCGTCAGGACCCGTGTGGTCAACGTGTCTGACGTCAGCGACTGTCCGAAGTTTGACTTGATCCTTCTAGGGATGGGACCGGATGGGCACGTGGCGTCATTGATCCCTGATCATCCGGTTCTCGAAGAAAAAAACGAGTGGGTGACATTCATCACCACTTCCCCTAAGCCACCCCCCGAAAGAATCACCTTCACCTTGCCCGTCATCAACTCTGCCGCCAATGTGGCGGTCGTGGCGACGGGTAGTGGGAAAGCAGAAGCTGTCCGGCTGGCTATAGACGATGTGGGACCCGAATGTGCGGTGTTGCCGGCTCGGATGATTGAACCAATTGTAGGGAAACTGGTGTGGTTTTTGGATCACCAGGCTGCTTCAAAGCTCAAAGGCTTTTCTCAATTTTCCAATTAG 804 47.64 MALLESNKNRGEVRIHESLDELSTDLADYIAELSEASVKERGFFAIALSGGSIITLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHADSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAANEYEFVIRQLVRTRVVNVSDVSDCPKFDLILLGMGPDGHVASLIPDHPVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVATGSGKAEAVRLAIDDVGPECAVLPARMIEPIVGKLVWFLDHQAASKLKGFSQFSN 267
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean12g01075 267 CDD 6PGL 20 251 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Hean12g01075 267 SUPERFAMILY NagB-RpiA-CoA transferase-like 13 260 IPR037171 -
Hean12g01075 267 Gene3D - 8 262 - -
Hean12g01075 267 PANTHER 6-PHOSPHOGLUCONOLACTONASE 5 260 IPR039104 -
Hean12g01075 267 FunFam Probable 6-phosphogluconolactonase 8 260 - -
Hean12g01075 267 NCBIfam 6-phosphogluconolactonase 15 259 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Hean12g01075 267 Coils Coil 19 39 - -
Hean12g01075 267 Pfam Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase 19 249 IPR006148 GO:0005975(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean12g01075 K01057 6-phosphogluconolactonase [EC:3.1.1.31]
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Event-related genes

Select Gene_1 Gene_2 Event_name
402507 Hean12g01075 Hean8g00419
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3209997 Hean Hean12g01075 Hean-Chr12:23094912 Hean3g00356 Hean-Chr3:15710739
3269415 Hean Hean17g04555 Hean-Chr17:194744687 Hean12g01075 Hean-Chr12:23094912
3277024 Hean Hean8g01968 Hean-Chr8:60129019 Hean12g01075 Hean-Chr12:23094912
3284124 Hean Hean12g01075 Hean-Chr12:23094912 Hean8g00419 Hean-Chr8:7227674