AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean14g01760 ATGAGGGAACCAACCACCGACAACAACCACAGCAGCGCCTCATCGTCGCCTCCACCACCGCCTCCACAGGCCCTGCTTGAAAGACTCAAAGACTATGGTCAAGAAGACACCTTTGCGTTCTGGGATCAGCTCTCTTCTGACCAACAGAACTTTCTTGTTCAAGAAATTGAGAGTTTGGATCTTCCTAGGATTGATAGGATGATTCGGTGCTCATTTCAGTCACACGGGCTACCGGCTGCCGCCATCGAGCCAGTGCCGGAAAGTTTTGTGTCAACTGTGGAGGATAGAAAGCTTGAAGATAGAGAAAAATGGTGGAAAATGGGATTAAAAGCTATTTCAGATGGAAAACTGGCTGTGCTGCTTTTATCTGGTGGACAGGGGACACGGCTCGGAAGTTCTGCCCCAAAAGGATGTTTTAATATTGGACTTCCATCAGGGAAGTCACTTTTCCAGCTTCAGGCTGAGCGAATTCTGTGTCTCCAGAGATTAGCAGCTCAATCGTTGGACGGGGGTTCCGGTAATGTTGTACCAATACATTGGTACATAATGACCAGCCCCTTCACCGATAAAGCCACACGTGATTTCTTCAAACATCACAAGTATTTCGGTCTCGAAACCGATCAGGTCACATTTTTCTCACAAGGCACAATACCTTGTGTTTCAAAAGACGGTAGATTTATCATGGAAACTCCATTCCAGGTGGCAAAAGCTCCTGACGGGAATGGAGGCGTTTATTCAGCGTTGAAGTATTCAAGACTATTAGAAGATATGTCGACGAGAGGGGTCAAGTATTTGGATTGTTATGGAGTTGACAACGCGTTGGTTCGTGTCGGTGATCCTACTTTCTTGGGGTATTTTATTGACAAGGGTGTAGCTTCGGCTGCTAAAGTTGTCCGTAAGGCATACCCTCAAGAAAAGGTTGGTGTATTTGTAAGGCGTGGTAAAGGTGGACCTGTAACCGTAGTTGAATATAGTGAGCTGGATCAGTCACTTGCAAGTGAAATTAATCAGGGAACTGGCCGACTTCGTTATTGTTGGAGTAATTTGTGCCTGCATATGTTCACGTTGGACTTTCTGAACCAAGTTGCCAATAGTCTGGAAAAGGACAGCATATATCATCTGGCTGAGAAGAAAATCCCGTCGATCCATGGGCAAACGGTTGGATACAAGCTAGAACAGTTCATATTTGATGCATTTCCATACGCACCTTCAACCGCACTTTTTGAGGTATTACGTGAAGAAGAATTCGCCCCTGTGAAGAATGCAAACGGGTCAAACTTTGACACTCCAGATAGTGCACGGCTTCTGGTTCTCCGCCTGCATACACGCTGGGTGGTTGCAGCTGGCGGCTTCTTAACACACTCGGTGCCTTTGTATTCCACCGGTGTCGAGGTTTCGCCACTTGTTTCATATACCGGAGAAAACCTTGAAGCAATTTGTCGCGGTAGAACATTCCATGCGCCTTGTGAAATCACATTCTAG 1482 46.36 MREPTTDNNHSSASSSPPPPPPQALLERLKDYGQEDTFAFWDQLSSDQQNFLVQEIESLDLPRIDRMIRCSFQSHGLPAAAIEPVPESFVSTVEDRKLEDREKWWKMGLKAISDGKLAVLLLSGGQGTRLGSSAPKGCFNIGLPSGKSLFQLQAERILCLQRLAAQSLDGGSGNVVPIHWYIMTSPFTDKATRDFFKHHKYFGLETDQVTFFSQGTIPCVSKDGRFIMETPFQVAKAPDGNGGVYSALKYSRLLEDMSTRGVKYLDCYGVDNALVRVGDPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRRGKGGPVTVVEYSELDQSLASEINQGTGRLRYCWSNLCLHMFTLDFLNQVANSLEKDSIYHLAEKKIPSIHGQTVGYKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVVAAGGFLTHSVPLYSTGVEVSPLVSYTGENLEAICRGRTFHAPCEITF 493
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean14g01760 493 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 489 IPR029044 -
Hean14g01760 493 MobiDBLite consensus disorder prediction 1 26 - -
Hean14g01760 493 SUPERFAMILY Nucleotide-diphospho-sugar transferases 24 491 IPR029044 -
Hean14g01760 493 CDD UDPGlcNAc-PPase 102 423 - -
Hean14g01760 493 FunFam UDP-N-acetylglucosamine diphosphorylase 2 19 489 - -
Hean14g01760 493 Pfam UTP--glucose-1-phosphate uridylyltransferase 66 449 IPR002618 GO:0070569(InterPro)
Hean14g01760 493 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 23 491 IPR039741 GO:0003977(PANTHER)|GO:0006048(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean14g01760 K00972 UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:25105816 Hean14g01760 Hean-Chr14:105585508 dispersed
Hean Hean-Chr14:105585508 Hean15g02854 Hean-Chr15:95306668 dispersed