AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean15g01351 ATGCAGAAGAGCGATGTGAGAGATCATCAGGCTTCTGCGACTTTAGATGACCTTGCTCTGGCTTCCAAGATGAGTGAGTTTGCTCTGGCTTTGAAGGATATGCAAGATATGAGAAACTGCTATGATTGCTTATTAGCTGCAGCTGCTGCAACCGCAAATAGTATATATGAATTTTCGGAGTCGCTAAACGAAATGGGGAACTGTTTGCTGGGGAAAACTGCTGCGGTCTGTGATTCTGAAAAGGGAAACGTGTTAACAACTTTGGGGAATTTGCAATTGGAACTTCAGAAAATTGCTGATACTTATCGTTCTTACGTAATTGTGACAATCACCAACCCAGCAGAGTCTCTCCTCAGTGAGCTACTAAAAGTGGAGGAGATGAAACTTCAATGTCAAGAGAAAAGAGAAGTGTACGATCACATGATGGCTCAACATAGAGAGAAGAGAAAACTGAAGAACGGTAAATTCGAAAGTTCAATTGCACAAAAACTGCAAGAAGCTCAAGATGAATATGATGAAATGGCTAGACTATGTGTATTTCGGGTGAAATCGCTCAAGGATGGACAATGGCACAGTCTTTTGACACAAGCTGCTCGCCATCATGCCGCACAGTTGAATTTCTTTCGCAAGGGACTTAAAGCTGTTGAAGCAGTTGAACCTTTAATAAGAAATGTTGCCGAAAAGCATCACATCGATTGCCAACTCAGGGGATTGTTTGATCGTGGGTCCCAGGAAGGTGAACCTATGAGTGGCCATGAAATTGTTAATGATGGAGATTTAAGTTTTGATTATAAACAAAAGAAACAAGGACTCGATGATGATGACACCTCGCCAAATCCAATGGAGCTGGACCCGGTAGATTTCCCATATTCTCAAGCTTCAATTTTAGAAGATTCAGAGATAAATCAGAATAGACATAAAGGGGAGCAACTTTTCGGTAGACAAACTAGAGTTAGCAGCTATTCCGCCCCACTATACCCAGAAAAAACTAAGGCATCTGAAAAGCTTAAAGAAACGCAACCCGCACCAAAATCATACTCGTATGTACTACCTCCACCCGTCGTGGATACCCGAAATCCAATTTTAAAACCTGCTACATCTCTTTCTCATAGCACATCATCGGCTGCTTTGACCTCAAAAGCCCAGTCAACAATAAAAACCATTAACAATATTACTCCATCCATCCAGTTACCCTCTCCCGCCACGTCTACCGGAAGATTTTCATTCTCACAACGGGATAGTTATTACCGAACCGATGGTAGTAAAGTAGACAAACAACAATCTTACTCTGGCCCGTTACCACCAAGCAAGCAATTTTCTTTCAAAATTGCATCTAATAGCAGCGGGCCCATTACTGGGCCCATTACTTCTACTGAGCTTCCTCACCCGCCTTCTCGGGCCCCCGTTTCTCAGCCCAATTTGTCGAATAATACTTCACCTCCCTCTTTATCTTCTCCTAAAATAAGTGAGCTTCACGAGCTTCCTAGACCGCCTCCTAGTAGTTTAGCCTTTTCTAAACCCATTGCTATTTCGGGTGGTTTGAGTCGACATTCAGCACCGTTACTTTCGAAAAATCAAGATATTTCTCCGCCTAATAAACGGGCTATGTTAACATCATCAACATGTGCTTCACCTCTTCCGCTTCCACCTTCTGTTGTGAAATTCAACTCAAGTAAAAGTGGGACCTGA 1689 42.63 MQKSDVRDHQASATLDDLALASKMSEFALALKDMQDMRNCYDCLLAAAAATANSIYEFSESLNEMGNCLLGKTAAVCDSEKGNVLTTLGNLQLELQKIADTYRSYVIVTITNPAESLLSELLKVEEMKLQCQEKREVYDHMMAQHREKRKLKNGKFESSIAQKLQEAQDEYDEMARLCVFRVKSLKDGQWHSLLTQAARHHAAQLNFFRKGLKAVEAVEPLIRNVAEKHHIDCQLRGLFDRGSQEGEPMSGHEIVNDGDLSFDYKQKKQGLDDDDTSPNPMELDPVDFPYSQASILEDSEINQNRHKGEQLFGRQTRVSSYSAPLYPEKTKASEKLKETQPAPKSYSYVLPPPVVDTRNPILKPATSLSHSTSSAALTSKAQSTIKTINNITPSIQLPSPATSTGRFSFSQRDSYYRTDGSKVDKQQSYSGPLPPSKQFSFKIASNSSGPITGPITSTELPHPPSRAPVSQPNLSNNTSPPSLSSPKISELHELPRPPPSSLAFSKPIAISGGLSRHSAPLLSKNQDISPPNKRAMLTSSTCASPLPLPPSVVKFNSSKSGT 562
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean15g01351 562 Gene3D Arfaptin homology (AH) domain-BAR domain 20 246 IPR027267 -
Hean15g01351 562 MobiDBLite consensus disorder prediction 469 486 - -
Hean15g01351 562 MobiDBLite consensus disorder prediction 518 562 - -
Hean15g01351 562 MobiDBLite consensus disorder prediction 418 562 - -
Hean15g01351 562 SUPERFAMILY BAR-IMD domain-like 25 222 IPR027267 -
Hean15g01351 562 CDD BAR 44 220 - -
Hean15g01351 562 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 7 375 IPR037488 -
Hean15g01351 562 MobiDBLite consensus disorder prediction 418 459 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean15g01351 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
102122 Hean14g03005 Hean15g01351
102485 Hean15g01351 Hean9g02212
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr15:33098377 Hean17g00880 Hean-Chr17:17774044 dispersed
Hean Hean-Chr15:33098377 Hean17g02149 Hean-Chr17:58893621 wgd
Hean Hean-Chr15:33098377 Hean17g04310 Hean-Chr17:187851830 wgd
Hean Hean-Chr15:33098377 Hean9g02212 Hean-Chr9:121884682 wgd