AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean15g01365 ATGGCAGCAGATAAGCTGAATAAGAGTTCTAAAGTAAGCAACGGCATTTGTCACACATCTTGGGAGATACAAAAAGTGAAAAAGAAAAAACATCCTCATTATGATTTAAATACAAAATCACGTATTTGTCTCGAGTGGGATGACAAGAAGGAACGTGTTGTTCCTAAGAAGGAGCAGATAAGCATTGCACAAAGAGAGTTGACTCCGTTTTTTCCTTTTGTCGCGCATTACCAAAATGTTCTCGGTGATGTCTTTGCAGCTCCTCCTGAATTATTTGAACTCAATAACTTGACCGGTTTGCTATCTTATGAGGTATGGCAAACTCAATTGTCGGTCCAAGAAAGAGAGTTTCTTACGCAGTTTCTTCCTGAAGGGAGCGAGCCACATGCAGTTGTTCATGAATTATTAGCTGGGAATAATTTATATTTTGGAAATCCATTTAAAAAATGGGGTGCTTCTATATGCTCGGGTAATTATCATCCTGATGCCATTCTTCGTCAAGAACAGCGTAACAAGGCTAATAAAGTAGCATATTATTCAGAATTGCAGGAATACCATACTAAAATGATAGGGAGTCTGCAATTGTGGAAGGAAAGATGGACAATATGCATGAATCCCGATAATTTTATGCAAAAAGTTCCAAGGCCTAAAAGGGATTTTCATAAAAGCGGGCCGTCACAAGAGATCGGCTTACAAAACGGTCCGCAACATGATTTGTGTGTAACATCTGGTTCTTGTTCATGGGACGCTGATGATAAATCATGCAATAATAACAGCCCAGATCTATCAGCTAGCAACGGAGAAGCATTAGCGAGTGTTTCCAGAACTGATTTGGAGAAAAGACCTAAAAAAGGAGATAAATTACGGAAGCTCAATATAGAGTGTGGTGATGGTGCCAAGTATATGTCATATATCAAGGTTAGCAAGGGGCAGCATGAACGAGTTAAAAGCAGTATGAAACAGTCTAACACCAGCATCCAACCACGGTCTCTTAATCTTGTTTTAGGAAATCTCGACGGTTTTTGTGTTCAACCATATGAACTGTTTGAGGAAGAAGAGAGACAGAAGTTGCATGGTCACTGGCTGGATTTGGCAAAGAAAGACCTCCCTGCTGGCTTTGAGAACTGGAAAAGTTGGCGATCTGCCAAGTGGCAGTTGACAGTGTCTTTGAGGAAAGAAATGGAAGATAAATGGAAGTCAAAGTCAAATGACGAGTCCGTTTTGAATTTGTATGATAATCAGGATGATGAGTCTATAGTTGATGGTCAGGATGAAGAGATAGAGCAATCGAGCGAAGAGCAACACGACGGTGAAGAAACAAATGACGCAATTTTAATCACATTAGAGGAGAACATGGAACAAAATGATATTTCAGTATTTCGGTCAGACGCCGATCGTAATGCAGAAAATCACGACACCACAAACAAGTCTAGTCAAGATTCTGGTCAACACCAAAACTTCTCTCCCATACCCATCAATACCAACGATGACGTTATAACAGAATCAGATGCTTTCCCTTGTAGTCTAGTTGATTATCCTGAAAGCATAAGTCACGCAGATACTTCCGTTGGTGAACAGTTTCCTCCGCCCTCTGCCGCCACTGAAATATGGCCGCTAGCTCCCTTACCAAGCGTGTACTACCATCAACCTACATCCGTAAGCCAAGATTACCCTTCCGTTAGTCAATCAAGTTTTCTCAACAGACGATCCGACAGTGGAGATTCTTTCTTTAATCCTTGCGCTAGTCAAGACCGTAACGAATTACTATTGCATTCCCATTATTCGGGAACCAGTCAGTTTTCCAGAAACTTAAGTTTGCCATTACCGTTAGATCCAAGATTAAACATTCAACAAAACGTATACGCAGATGGAGCAGGTCGGTTTCCGATTCCAAGGGAAGAACACGAACACCTGTCGCCACTGGACCACGTTCAGGGTTGGCCCGGGACTGGTATTGTCAACCTGCCAATGTCAGCAGCGTCTCATCACCGGTTAAGCCAAAACTGGTTTTCCGATGATGAGGTGGCACGAGACGGGTGGTCAGGTGGTGTAGTTCCAAACCATGACATTGGAAGTGGTGGCGGTCAGGTGGTTGATGAGAGCTTATATAGTGTGTTATCCGAGTGTAACGGGTTGCGTTCAGGTCATTATATTCAGTCTGAAAACTATGCGGAGGCCGGACGTGAATCGGTTCCGTCACGTGTCGGTAGAGGGTCGGGTTTTAACTACATGAGTGGCAATGAAGGTCAGTTGGGATGGATTGGATTGCAGGAGAGTGGGGGGAAACAGCCATTTGCAAGGTTATGGAATGATAGAAGTTTAGGGTGA 2328 42.83 MAADKLNKSSKVSNGICHTSWEIQKVKKKKHPHYDLNTKSRICLEWDDKKERVVPKKEQISIAQRELTPFFPFVAHYQNVLGDVFAAPPELFELNNLTGLLSYEVWQTQLSVQEREFLTQFLPEGSEPHAVVHELLAGNNLYFGNPFKKWGASICSGNYHPDAILRQEQRNKANKVAYYSELQEYHTKMIGSLQLWKERWTICMNPDNFMQKVPRPKRDFHKSGPSQEIGLQNGPQHDLCVTSGSCSWDADDKSCNNNSPDLSASNGEALASVSRTDLEKRPKKGDKLRKLNIECGDGAKYMSYIKVSKGQHERVKSSMKQSNTSIQPRSLNLVLGNLDGFCVQPYELFEEEERQKLHGHWLDLAKKDLPAGFENWKSWRSAKWQLTVSLRKEMEDKWKSKSNDESVLNLYDNQDDESIVDGQDEEIEQSSEEQHDGEETNDAILITLEENMEQNDISVFRSDADRNAENHDTTNKSSQDSGQHQNFSPIPINTNDDVITESDAFPCSLVDYPESISHADTSVGEQFPPPSAATEIWPLAPLPSVYYHQPTSVSQDYPSVSQSSFLNRRSDSGDSFFNPCASQDRNELLLHSHYSGTSQFSRNLSLPLPLDPRLNIQQNVYADGAGRFPIPREEHEHLSPLDHVQGWPGTGIVNLPMSAASHHRLSQNWFSDDEVARDGWSGGVVPNHDIGSGGGQVVDESLYSVLSECNGLRSGHYIQSENYAEAGRESVPSRVGRGSGFNYMSGNEGQLGWIGLQESGGKQPFARLWNDRSLG 775
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean15g01365 775 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 88 199 IPR044867 -
Hean15g01365 775 MobiDBLite consensus disorder prediction 417 433 - -
Hean15g01365 775 PANTHER NFRKB-RELATED 1 482 IPR024867 GO:0031011(InterPro)
Hean15g01365 775 MobiDBLite consensus disorder prediction 474 495 - -
Hean15g01365 775 CDD DEUBAD-NFRKB 90 196 - -
Hean15g01365 775 MobiDBLite consensus disorder prediction 257 272 - -
Hean15g01365 775 MobiDBLite consensus disorder prediction 395 440 - -
Hean15g01365 775 MobiDBLite consensus disorder prediction 257 283 - -
Hean15g01365 775 MobiDBLite consensus disorder prediction 467 495 - -
Hean15g01365 775 MobiDBLite consensus disorder prediction 214 236 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean15g01365 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr15:33353241 Hean17g02128 Hean-Chr17:58452596 wgd