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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean15g03883 ATGGCCGACAAGACCAACGCTGTGGTTACAAGAACCTATGAAACTGGACCATGCCAAGAGGAGGATGCAAGCTCCGGCATCCGCACCGCGGAGACGCTGCTGAGACTTTTCCCGGTGGGGCTGTGTGTGGCCGCGCTAGCCGTCATGATTAAGGATTCGGAAACTAATGAATATGGTTCTTTATCCTACTCCAACATCACCGCTTTCAGGTTTTTGGTGCATGCTAATGGTATATTGGCTGGTTATTCGCTGCTATCGGCTGCTTTCACGGCAGTACCTCGCCCTATAACCATGTCACGAGCCTGGACCTTTTTCCTCCTTGACCAGGTTTTAACATACCTGATATTGGCCGCGGGTGCTGTGGCTACGGAGGTGGCGTTTCTGACGTATAAAGGTGACGTGGCAGTGACATGGAGTGAAGCGTGTGGGACCTACGGTAGGTTCTGTAAACAAGCAACAACGTCGATCATCATCACGTTTCTGGTGGTGGTCTGCTACATTATACTATCGTTAATTTCATCATATAGGTTGTTTAGTAAGTATGACGCACCTGTTGAGTATCGTAACAAGGGGATTGAGATCGTTGACTTTGGGAATTAA 600 48.83 MADKTNAVVTRTYETGPCQEEDASSGIRTAETLLRLFPVGLCVAALAVMIKDSETNEYGSLSYSNITAFRFLVHANGILAGYSLLSAAFTAVPRPITMSRAWTFFLLDQVLTYLILAAGAVATEVAFLTYKGDVAVTWSEACGTYGRFCKQATTSIIITFLVVVCYIILSLISSYRLFSKYDAPVEYRNKGIEIVDFGN 199
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean15g03883 199 PANTHER CASP-LIKE PROTEIN 4A4 28 179 - -
Hean15g03883 199 NCBIfam plant integral membrane protein TIGR01569 34 175 IPR006459 -
Hean15g03883 199 Pfam Casparian strip membrane protein domain 25 165 IPR006702 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean15g03883 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402147 Hean11g00720 Hean15g03883
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr5:170807652 Hean15g03883 Hean-Chr15:147460913 transposed
Hean Hean-Chr11:15421942 Hean15g03883 Hean-Chr15:147460913 wgd