AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean15g03947 ATGGCCGACATCGAAACCCTAGGCATCATTGATGAAATTCAAGCACTCGTCTCCGACAAGCTTCAAGTGGTTTCTTACAAGTGGTTGAGTAGGAACTTCTTGGTGCCATCAGATACTGCTAAGAGGCTGCTTCAAGAGTTTGTGGAAAAGAATGGAAGTCAACTGGAAGTTATATATTCTCTGTCCGGTTGGTTGAAAAATAATCCAGAAGCTTACCATGTAAAGCTTGTTTTGGGCGCTAAACTTTCAGAAGCCAAAGAAGAGTTTAACGATGGTTGTTCAGTTCAAGTCTATAGCATCCAAGCTTGTGTTCCTAAAGATCCAGCAGTTCTCTGGAATGCTGAATTTGTACAATCGGAAGAGCTATTCAAGGAGCCTCCTAATGTTGTTAACTGCTTGCGTGATAATCGGTTCTGTGGTGTTTCAAATCCGTTTGTAAAACGTAATGTAGAGGGAACACCTGTTAACAGCGCAGGTCCACAGTTAAAAAACGTAGTAACCCACGGACAATCAAGAATCAATCAAACGTCACTTGGAAAAGAAAAGAAGATTGAGCAATCAGACGCTAAACCTAATCAAGGCGTAAATATTCAAAGTGGAAGTCATAAAGAACAAGTTCCTCAAAACAAAAAGAAAACACAAAATGATAAAGTCTCTTCCGGCACTTCAAGCTCCTTAGCTAGTATGTGGGGCCGTGCATCTGCAAAACCGAAGCCTGAGTCTGCCTCAGTAAAAACTGATACCGTCGCTCCTATTTCTAATGATGCTCAGGTGCGTGCTAATGAATCTGTGGAGGATGAAAGCAGTGATGATCAACAAATGAACTTTAAAAGAGCGTCTAATGGTGAAGGAAATAATAGAAAAAGAAGGGTTGTGTTAGATTTCTCTGATGAAGATGATAATGTTGAAGACGCAGTGAATCTCGCCTCACCAGATCCACCAAAAAAGCAAGTTGCTGCTCTTGATTCAAAGAAAAGTTGTAGCATTTCGGGTCTTGAAAATAAGAATTTGGATTTTGATGAACAAAAAGAAGTTAAGAACGAAAAGGCAACCGAGACTGATCCCAAGCCTTTAACTGAGAATAAACGTTCTCACGAAAATGATGTAAAACAGGAAGATAAAACGAGCAATGCTGTTAAAAATGGGACTAAGAAAAGAAAAGTTTTGAAGACGCGCATCGATGAGCGTGGAAGAGAAGTAACTGAGGTGGTTTGGGAGGATGATGAGAAAGAAACAAGACCTGATGACAATACACGAAAAGATAAAGATGACAATAAAACCGCAAGCAATATTGCTGTCAACAGGCCGGCTGCAGCAGCAGCAGCTCCGAAGAAGTCACCTGCAGTAGGTAATGCCCCGTCACATGCGACAGGCAAAGCAGGGAATAAGAAAACCAATGCGAAGGATCCCAAACAGGGCAATATCATGTCCTTTTTCAAAAAGGTTTAA 1449 41.06 MADIETLGIIDEIQALVSDKLQVVSYKWLSRNFLVPSDTAKRLLQEFVEKNGSQLEVIYSLSGWLKNNPEAYHVKLVLGAKLSEAKEEFNDGCSVQVYSIQACVPKDPAVLWNAEFVQSEELFKEPPNVVNCLRDNRFCGVSNPFVKRNVEGTPVNSAGPQLKNVVTHGQSRINQTSLGKEKKIEQSDAKPNQGVNIQSGSHKEQVPQNKKKTQNDKVSSGTSSSLASMWGRASAKPKPESASVKTDTVAPISNDAQVRANESVEDESSDDQQMNFKRASNGEGNNRKRRVVLDFSDEDDNVEDAVNLASPDPPKKQVAALDSKKSCSISGLENKNLDFDEQKEVKNEKATETDPKPLTENKRSHENDVKQEDKTSNAVKNGTKKRKVLKTRIDERGREVTEVVWEDDEKETRPDDNTRKDKDDNKTASNIAVNRPAAAAAAPKKSPAVGNAPSHATGKAGNKKTNAKDPKQGNIMSFFKKV 482
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean15g03947 482 MobiDBLite consensus disorder prediction 336 380 - -
Hean15g03947 482 MobiDBLite consensus disorder prediction 388 428 - -
Hean15g03947 482 FunFam DNA polymerase delta subunit 7 149 - -
Hean15g03947 482 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 481 IPR019038 GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(PANTHER)|GO:0043625(InterPro)|GO:1904161(PANTHER)
Hean15g03947 482 MobiDBLite consensus disorder prediction 282 296 - -
Hean15g03947 482 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 145 IPR041913 -
Hean15g03947 482 MobiDBLite consensus disorder prediction 150 482 - -
Hean15g03947 482 MobiDBLite consensus disorder prediction 212 230 - -
Hean15g03947 482 Pfam DNA polymerase subunit Cdc27 23 481 IPR019038 GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro)
Hean15g03947 482 MobiDBLite consensus disorder prediction 154 177 - -
Hean15g03947 482 MobiDBLite consensus disorder prediction 189 204 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean15g03947 K03504 DNA polymerase delta subunit 3