AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean15g04020 ATGGAGGGCGCTGATGCTAGTGCCAGTCACAAGTATGCTAAAGAATTACAAGTGGGTGTAAGAGTTGTACAAATGGCTTGTTCTCTTTGTCAGAAGCTGCAAAAGGGCTCGGTTGGTCCCAGCCCTGATCACGTTATTTCGAAAGATGATGATTCACCTGTTACTGTTGCCGATTGGAGTGTACAAGCAATGATTAGCTGGATGCTATCAGAATCGTTCGGTAGAGAAAACGTCTCAATTGTTGCAGAAGAAGATGCACAAACACTTTCTGATGATTCTGCCACAAGTTTATTGGCATCCGTGGTTGCAACCGTGAACGAAACTTTAGCCATGGCACCGCGTTTCGGTCTCAAGGGTCCAACCAAACCTCTTGGGGGTTCAGAAATTCTTGATGCCATTAACTGCTGCAATTCAACTGGTGGTCCGGTTGGAAGACATTGGGTTCTTGACCCTGTTGACGGAACCCTAGGGTTTGTGCGTGGAGATCAGTACGCTGTCGCACTTGCGTTGATTGAAAACGGGCAGGTTGTGGTTGGGGTTCTTGGGTGCCCTAATTATTCGAGTAAAAGGAAATTGGTAAATAATTCAAGTGTACGGTCGGATTTATGGCAAGAAGGGTGTGTTATGTACACAAGTAAAGGTAGTGGTCAAGCTTGGATGCAACCACTGATTCAGGGTCACGGGTCACTTGAATGGCCCAATTCGGCTAGCGTTATACGTGTTTCTTCCATTGATAATCCTGTTATGGCTACATTTTGTGAACCAGTCGAGAAAACTAACTCTAACCATTCTTATAGCGCTGGAATTGCTCACAGAGTAGGGCTTAGAAAGCAACCGTTGCGTGTGTATAGCATGGTAAAATATGCAGCAATCGCGCGTGGAGATGCAGAGATATACATGAAGTTTGCAAAAGCTGGATACAAAGAAAAGATATGGGATCATGCTGCTGGGGTGGTAATTGTGGAGGAAGCTGGCGGGGTTGTGACGGATGCTGGCGGCCGGCCATTAGATTTCTCAAAAGGCGTGTATCTTGAAGGTCTCGACCGGGGAATTGTTGCCTGTTCTGGAGTGAATTTACATGAGAAAATCATAGGGGCTGTTTATGCAAGCTGGGATTCCTCTCATCTTTAA 1131 45.98 MEGADASASHKYAKELQVGVRVVQMACSLCQKLQKGSVGPSPDHVISKDDDSPVTVADWSVQAMISWMLSESFGRENVSIVAEEDAQTLSDDSATSLLASVVATVNETLAMAPRFGLKGPTKPLGGSEILDAINCCNSTGGPVGRHWVLDPVDGTLGFVRGDQYAVALALIENGQVVVGVLGCPNYSSKRKLVNNSSVRSDLWQEGCVMYTSKGSGQAWMQPLIQGHGSLEWPNSASVIRVSSIDNPVMATFCEPVEKTNSNHSYSAGIAHRVGLRKQPLRVYSMVKYAAIARGDAEIYMKFAKAGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSKGVYLEGLDRGIVACSGVNLHEKIIGAVYASWDSSHL 376
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean15g04020 376 ProSitePatterns Inositol monophosphatase family signature 2. 312 326 IPR020550 GO:0046854(InterPro)
Hean15g04020 376 Gene3D - 240 370 - -
Hean15g04020 376 ProSitePatterns Inositol monophosphatase family signature 1. 147 160 IPR020583 -
Hean15g04020 376 FunFam PAP-specific phosphatase HAL2-like 240 373 - -
Hean15g04020 376 SUPERFAMILY Carbohydrate phosphatase 12 369 - -
Hean15g04020 376 Gene3D - 10 229 - -
Hean15g04020 376 Pfam Inositol monophosphatase family 51 368 IPR000760 -
Hean15g04020 376 PANTHER PHOSPHATASE 6 372 IPR051090 GO:0000103(PANTHER)|GO:0008441(PANTHER)|GO:0042578(PANTHER)
Hean15g04020 376 CDD PAP-phosphatase 15 369 - -
Hean15g04020 376 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 12 374 IPR006239 GO:0006790(InterPro)|GO:0008441(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean15g04020 K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr15:156687500 Hean16g02800 Hean-Chr16:142178414 dispersed