AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean15g04026 ATGCAACCCCAGAAAACCCTACCGGAATCCGACCTACCATCACTCGCCGCCATCAAAGTGAAATCCTCCTCACCTCGTTTCCGCCCCACCGCAAACCCTTCCGCCACCGAAACCCCCACCGCCGGCGCCCAACGCCGCATCGGCATCGCCGTCGACCTCAGCGACGAAAGCGCCTTCGCCGTTAAGTGGGCCGTCCACCAGTACATCCGCCCCGGCGACGCCGTGATCCTCATCCACGTCCGCCCTACTTCCGTCCTCTACGGCGCTGACTGGGGCTCCGTTGACCTCTCAATCGTTGACACTGACGATGAAGCTTCGAAGCTCAAACTCGAAGACGATTTCGACACTTTTACGACGACTAAAGCTGCGGACCTAGCGCAGCCTCTGGTGGACGCGCATATACCGTATAAGATCCATATTGTGAAAGATCATGATATGAAAGAGAGGCTGTGCTTGGAGGTTGAGAGGTTGGGGTTAAGTGCGGTTATTATGGGGAGCCGAGGGTTCGGTGCCACCAAACGGGGCAGTGATGGGCGGCTTGGGAGTGTGAGTGATTACTGTGTGCGTCATTGTGTGTGTCCGGTTGTCGTTGTCAGGTATCCGGATGAGAAGGATGCAGCAGTTGCCACTGTTTCTGATGATGTGCCCAAATGTGAAACATATAGAGGGAATGCTCTCTGTGTGACTCTTTCATTTAAGGCTGAGCAGGAGGCATTTTTTTCGTGTTTGAATTTGGATATTATGATGTATGAGGTGTGTCTGAGGTAG 768 54.17 MQPQKTLPESDLPSLAAIKVKSSSPRFRPTANPSATETPTAGAQRRIGIAVDLSDESAFAVKWAVHQYIRPGDAVILIHVRPTSVLYGADWGSVDLSIVDTDDEASKLKLEDDFDTFTTTKAADLAQPLVDAHIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGATKRGSDGRLGSVSDYCVRHCVCPVVVVRYPDEKDAAVATVSDDVPKCETYRGNALCVTLSFKAEQEAFFSCLNLDIMMYEVCLR 255
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean15g04026 255 MobiDBLite consensus disorder prediction 25 41 - -
Hean15g04026 255 Gene3D HUPs 34 212 IPR014729 -
Hean15g04026 255 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 202 - -
Hean15g04026 255 PANTHER OS01G0783500 PROTEIN 7 211 IPR044162 -
Hean15g04026 255 MobiDBLite consensus disorder prediction 22 43 - -
Hean15g04026 255 CDD USP-Like 46 198 - -
Hean15g04026 255 PRINTS Universal stress protein signature 44 62 IPR006015 -
Hean15g04026 255 PRINTS Universal stress protein signature 177 199 IPR006015 -
Hean15g04026 255 Pfam Universal stress protein family 45 199 IPR006016 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean15g04026 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:26531266 Hean15g04026 Hean-Chr15:157066996 dispersed
Hean Hean-Chr15:71835228 Hean15g04026 Hean-Chr15:157066996 dispersed
Hean Hean-Chr15:157066996 Hean17g02614 Hean-Chr17:82481339 dispersed
Hean Hean-Chr15:157066996 Hean7g02115 Hean-Chr7:124142737 transposed