AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean15g04040 ATGGCTTCCATGACTACCACCACCTTCACCTCATCTCTCTCCAACAAGACCTCCTATCAATCATCCTTCCATGGGGTTTCTCCGACGCGGATCCAATCCATCGTCGTTAAATCAAACCAAAACAAGAACACGCCTATCACCATGTCTTACGACCTCGGTCAATTCACCTTTCAACCGATCAAGGAGGCCATCGTGTCTCGTGAAATGACCAGGAGGTACATGACTGATATGATCACCTACGCCGATACGGATGTGGTCGTTGTTGGTGCTGGCTCCGCTGGTCTCTCCTGCGCTTACGAGCTTAGCAAGAACCCTAACGTTCAGGTAGCCATCATTGAGCAATCTGTGAGCCCTGGTGGCGGAGCATGGCTGGGAGGACAACTCTTCTCCGCCATGGTTGTCCGCAAACCCGCACACCACTTCCTTGACGAGCTTGAGATCGAGTACGACGAGCAAGAAGACTACGTGGTCATCAAACACGCTGCTCTGTTCACATCGACCATCATGAGCAAGCTTTTGGCGAGGCCAAACGTGAAGCTCTTCAATGCGGTTGCTGCGGAGGATTTGATCATCAAAGAAGGGAGAGTTGGTGGTGTTGTAACCAACTGGGCTTTGGTGTCGATGAACCATGACACACAGTCATGCATGGACCCTAACGTCATGGAGGCTAAGGTGGTTGTTAGCTCATGTGGTCATGATGGTCCCATGGGTGCCACCGGGGTCAAGCGCCTCAGGAGCGTTGGGATGATTGAAAGCGTTCCCGGGATGAAAGCTCTCGACATGAACACTGCTGAAGACGCAATCGTGAAGCTCACAAGAGAGATTGTTCCGGGTATGATCGTTACCGGAATGGAAGTTGCAGAGATTGATGGATCTCCTAGAATGGGGCCAACATTTGGGGCTATGATGATATCTGGACAGAAAGCGGCTCATCTGGCATTGAAGGCCCTCGGGCTGCCGAATGCATTGGATGGGACAAGCGTTCACCCTGAGCTGATCCTTGCGGCTGCTGATTCTGGCGAGACCGTTGATGCCTAA 1038 52.12 MASMTTTTFTSSLSNKTSYQSSFHGVSPTRIQSIVVKSNQNKNTPITMSYDLGQFTFQPIKEAIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKEGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGMIESVPGMKALDMNTAEDAIVKLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTSVHPELILAAADSGETVDA 345
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean15g04040 345 FunFam Thiamine thiazole synthase, chloroplastic 82 317 - -
Hean15g04040 345 Gene3D - 82 327 IPR036188 -
Hean15g04040 345 Pfam Thi4 family 66 299 - -
Hean15g04040 345 PANTHER THIAMINE THIAZOLE SYNTHASE 9 344 - -
Hean15g04040 345 SUPERFAMILY FAD-NAD(P)-binding domain 46 310 IPR036188 -
Hean15g04040 345 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 3 326 IPR027495 GO:0009228(InterPro)
Hean15g04040 345 Gene3D - 51 81 - -
Hean15g04040 345 NCBIfam sulfide-dependent adenosine diphosphate thiazole synthase 62 317 IPR002922 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean15g04040 K03146 cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60]
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Event-related genes

Select Gene_1 Gene_2 Event_name
402191 Hean11g01647 Hean15g04040
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3282939 Hean Hean11g01647 Hean-Chr11:50396547 Hean15g04040 Hean-Chr15:158449611