AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean15g04051 ATGGGTTGCAGAAATGGAGAAGAAGACAGATCATCATCATCATCGGGGGGTATTATTGTAAACGATGTGCTGCTGCTTACAAGCATGTGTCTCATTGGGCTCTCCGTGGATGTGCACATCAAGGATGGCTCTGTTTATTCTGGAATCTTTCACACTGCCTCTGTCCACCACCCTTATGCTATTGTGTTGAAACGAGCAAAGATGACCAAGAAAGGGAGTTGTAATTCAAATGTGGCCAATGAGGAGGTCATCCGGACACTCATAATCCAATCAGAGGATCTTGTTCAAGTAGTCGCAAAGAAAGTAACAATTCCGGCAGATGGTTTTGCTGGTCATGGAACTGGAGATGAAACAGGGGCTGTTGCATGCTCTTTTCCTTCTAATGGAATTTCACTGACAGAATCAAATAAAACAATGACTGGCAAGTCAAATGTTGGTCAACCACACACTAATCAAACAAGATGCTCATCTGGAACTGAAAACGGGTTTGCTAACGGATGTAGACCTCCTGTAAACACCATTCGATCAACCGATACTCTTGAAGTAAAAGATATAGATGCGAAAGATTCAACAAAGAAGGAAAATTGTTTGAAGGATCCAGATGATAACAGAAAGTATGGCAACCACACTAGCTCATCAGCTCCGAGTGAAACCGTCACTACAAAAATCTCAAATTCTAATCCAACCACTAAGGAGTTTAAACTTAACCCTGGTGCAAAGATATTTTCTCCATCATTTCCTAATAAAAGATCAGCAACCCCTCAAGCAATGGTGACGGGTACAAATCTTGTATACAATCCCGACACTCATCCTAGTGGCCCACAGCCCGAAGTTGAAATCAGCCCATTTGCTCCCCGTTCCGTGCCTGTTAAGTTTGTTCCATATGCAGGCAATGATGTACACCATCCTCCTCCTATTGTTGGATATATGACAAACAGGAGTCAACCCGCCAGATACGGGTCATATCATCCTGTCCAAACAGCACCTACCTATGTCCAACCAAGCTCTCAGAATGTAATGGTTGGACGATTAGGGCCCGTTGTCTATGTTCATCCGGTTTCCCAAGACATGGTGCCAAGCACGAACAGCTTCTCCTCTGTTTTAACTCCACACCAACTCCATGTCCCTAAACACCAAGGAACCACGGCGGGTCAAGCGTTGCAACTATCACCATTTGTAGGTGGTGGTCAGGCACCACCATATGTTTTGCCAGGCCACATTCCCATATCACAACTGCCTTACCCTGTCATCTCAATCCCCGGATCTAATGGCTTTTTAGTATCAAAATTTTCTTGA 1296 44.21 MGCRNGEEDRSSSSSGGIIVNDVLLLTSMCLIGLSVDVHIKDGSVYSGIFHTASVHHPYAIVLKRAKMTKKGSCNSNVANEEVIRTLIIQSEDLVQVVAKKVTIPADGFAGHGTGDETGAVACSFPSNGISLTESNKTMTGKSNVGQPHTNQTRCSSGTENGFANGCRPPVNTIRSTDTLEVKDIDAKDSTKKENCLKDPDDNRKYGNHTSSSAPSETVTTKISNSNPTTKEFKLNPGAKIFSPSFPNKRSATPQAMVTGTNLVYNPDTHPSGPQPEVEISPFAPRSVPVKFVPYAGNDVHHPPPIVGYMTNRSQPARYGSYHPVQTAPTYVQPSSQNVMVGRLGPVVYVHPVSQDMVPSTNSFSSVLTPHQLHVPKHQGTTAGQALQLSPFVGGGQAPPYVLPGHIPISQLPYPVISIPGSNGFLVSKFS 431
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean15g04051 431 PANTHER ATAXIN 2-RELATED 175 404 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Hean15g04051 431 MobiDBLite consensus disorder prediction 191 229 - -
Hean15g04051 431 MobiDBLite consensus disorder prediction 207 229 - -
Hean15g04051 431 MobiDBLite consensus disorder prediction 139 163 - -
Hean15g04051 431 MobiDBLite consensus disorder prediction 139 175 - -
Hean15g04051 431 Pfam Ataxin 2 SM domain 21 100 IPR025852 -
Hean15g04051 431 MobiDBLite consensus disorder prediction 191 206 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean15g04051 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402187 Hean11g01620 Hean15g04051
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3282935 Hean Hean11g01620 Hean-Chr11:49252851 Hean15g04051 Hean-Chr15:159109578