Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean16g00799 | ATGTTCTTCCGAATTCCAATCTCTTCATACCACCAGGCCGCCATTGTCATCAACCTCGAGCTTATTCTGAACTCGCTAGGGTTACAAATGGAGAATAAACACAAGCTTAAAATCGCATTCACAGTCACTTTTCTTGCTGTGGCTTCAATTTTACTTGCGAACAAGTTTCGAAAACATCGAAAGCGAAAACAGAACTCAACTTCTTGTTACTTGAAATCGGAAGCAAAACCGCAGCATAATTTCAAGCGTGTGTTAGCGAACAATTCGTATGCTCCGTTCAAGCACCTCAAGCTCGACGAAAATTCTTCGGATTTGCATCCGTATGAATCAGAGATCAAGGCTCTGTTGGAGAAATTACAGCTAGATATTGAGTTTTCTAATGGAAGTATGGATATGAAGATGAGTGATAAGTATGTTTGGGTTGATGATGAATTAAAGTTAAAAGAACTTGTGGAAGTTTTAAGTGAAGAAAGAGTGTTTGCTGTGGATACTGAACAGCATAGCTTACGGTCATTCTTAGGGTTTACAGCTCTTATTCAGATTTCTACTAGAGATGAAGATTATTTGGTGGACACCATTGCTGTTCATGATATTATGGGACTTCTTGGCCCTGTATTTGCCAATCCCAATATCTGCAAGGTGTTCCATGGTGCTGATAATGATGTTATATGGCTACAAAGGGATTTTCATATATATGTTGTAAACTTATTCGACACTGCAAAGGCTTGTGATGTTTTATCAAAACCACAGAGATCATTAGCCTACTTACTTGAAACGTATTGTGGTGTCACCACTAACAAGCTTTACCAGCGTGAAGATTGGCGACAACGTCCGCTACCAATAGATATGGTTGAGTATGCTCGGATGGATGCACACTATTTGCTTTATATTGCAGACTGTCTCGTTTCTGAGCTAAAAAACCAGAAAAACGAAAATTCAGCCACTCTCGATGACGATTTGCATTTTGTTTCTGAGGCCATCCGGCGTTCGAATGCCTTGTGTCTGCAACTCTTCACCAAAGATCTAGAAGCTTCCCCAGGGCAATCTGCTGCTGCTTCTATGATTTCTCGCCACTTAAATGATCATGGGAGTTCTGCAAACAACAGCCAGTTTCAGGATCTTGTTAGACGTCTATGCTGTTGGAGGGATTTGATGGCCCGTATGCATGATGAGAGCCTTAAATACGTACTATCTGATAATGCTATTGTATCTCTAGCTGAAACAGTTCCACTATCTCCAACTGATATCTGCACCACATTATCACAAGCTGATATAGACACAGATTTTCTAAATTCCAATTCTACCCCTCGGTTTCCATCCTCTGTTGTCTCGAGTCATTTGGATGACTTCCCTTACCTCCTCCAAAACGAGACAAACAATCTCGACGATTTATTTCAACTAATTCTCAAAAAGCACATTGGTCCAAACGGTTCTTGTCCTTTTTCACTTTACAACTATGGTTTACTTTCTAAAACCAACATTAAATCTTCAAAGAGATTAGTTACAAAGGCGAGTGGATACAAGTTATCAAAACAAGTTGCTCGCAAGGCTTCTCGAGAGCTGTTTGTTCAGAAGTTCTCTTGCAAATCTCCGGTGTATCATAACTGCAGGATATATGCTAATGATGGAAGATTGTTGTGTTACTGCGATCGAAGGAAGCTAGAATGGTATGTGCAGCGGGACCTAGCGAAAATTGTTGACGAAGACCCACCAGCCATAATGCTTCTTTTTGAACCCAAAGGTCGTCCAGAAGATGAAGGAAATGATTTTTATATTCAAAGTAAAAAAAATATATGTGTAGGGTGTGGTGAAGGAAATCACTATTTACGGTACCGTATAATCCCATCATGCTATAGAATACACTTTCCCGAACATTTAAAAAGCCACCGGTCTCATGACATTGTTTTAGTTTGTGTCGATTGCCATGAAAAAGCACATTCATCTGCCGAAAGGTACAAAAAGAAAGTAGCTTTAGAATTCGGGATACCGTTATTTGTACATAAAGTGGTTAATTCTAACGAGCAACAAGATGTTTCCGGATCTTCGACATCTGTCATGAAACTTGGTGATTGTGGTGTGTCTCCTTTAGAGTTGAGAACGGCTGCAATGGCTCTTATTAGGCATGGCCCACGCATGCCACCTCAGCGCCGTGAGGAGTTGAAACAGGTTGTCAAGAAATACTATGGAGGAAGAGAAATATCAGAGGAAGATTTAGAAAAGGCTTTACTAGTAGGAATGAGTCCTCACGAAAAAAGACGATTACGGAAAAAAAGGGGCATATCTCTTAACAACACTTCTTCAAACAACATTGTTTCAGACAACGACATCAAGGGAGAAGATAATGTGGATTCATACAAAAATGAAGTTCACGAGCCCGAAAACGGTTCAAATCTGGATATTACGGATCCATCTGAAGTTGAACCAAACGGGCAGGTTCATTCGAGTTCTGATGGGGCGGTGTTTGCCACATGTAGTTCAAAGTTATCGTTATTAGGGCATGGCCCACATGGGAAACAAGTTGTTGATTATTTACTGAAGAACCATGGGGAAGTTGGGATTCAAGAATTTTGTCAAAGATGGAGGCAAGTTTTTGTTGAAAGTATTAATCCTCGGTTTTTGCCTGCGGGGTGGGATGTGACTCACAGCGGTAGAAGAGAGTTTGGGGACTTCAGTGTATACAATCCTGCAAATAAAGCTCCTGTTGCTACTAAGGATTAA | 2718 | 40.51 | MFFRIPISSYHQAAIVINLELILNSLGLQMENKHKLKIAFTVTFLAVASILLANKFRKHRKRKQNSTSCYLKSEAKPQHNFKRVLANNSYAPFKHLKLDENSSDLHPYESEIKALLEKLQLDIEFSNGSMDMKMSDKYVWVDDELKLKELVEVLSEERVFAVDTEQHSLRSFLGFTALIQISTRDEDYLVDTIAVHDIMGLLGPVFANPNICKVFHGADNDVIWLQRDFHIYVVNLFDTAKACDVLSKPQRSLAYLLETYCGVTTNKLYQREDWRQRPLPIDMVEYARMDAHYLLYIADCLVSELKNQKNENSATLDDDLHFVSEAIRRSNALCLQLFTKDLEASPGQSAAASMISRHLNDHGSSANNSQFQDLVRRLCCWRDLMARMHDESLKYVLSDNAIVSLAETVPLSPTDICTTLSQADIDTDFLNSNSTPRFPSSVVSSHLDDFPYLLQNETNNLDDLFQLILKKHIGPNGSCPFSLYNYGLLSKTNIKSSKRLVTKASGYKLSKQVARKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYVQRDLAKIVDEDPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHSSAERYKKKVALEFGIPLFVHKVVNSNEQQDVSGSSTSVMKLGDCGVSPLELRTAAMALIRHGPRMPPQRREELKQVVKKYYGGREISEEDLEKALLVGMSPHEKRRLRKKRGISLNNTSSNNIVSDNDIKGEDNVDSYKNEVHEPENGSNLDITDPSEVEPNGQVHSSSDGAVFATCSSKLSLLGHGPHGKQVVDYLLKNHGEVGIQEFCQRWRQVFVESINPRFLPAGWDVTHSGRREFGDFSVYNPANKAPVATKD | 905 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean16g00799 | 905 | MobiDBLite | consensus disorder prediction | 763 | 814 | - | - | |
| Hean16g00799 | 905 | ProSiteProfiles | HRDC domain profile. | 368 | 453 | IPR002121 | GO:0003676(InterPro) | |
| Hean16g00799 | 905 | Pfam | 3'-5' exonuclease | 138 | 305 | IPR002562 | GO:0003676(InterPro)|GO:0006139(InterPro)|GO:0008408(InterPro) | |
| Hean16g00799 | 905 | SUPERFAMILY | Ribonuclease H-like | 76 | 310 | IPR012337 | - | |
| Hean16g00799 | 905 | FunFam | Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain | 75 | 344 | - | - | |
| Hean16g00799 | 905 | SMART | 35exoneu6 | 138 | 306 | IPR002562 | GO:0003676(InterPro)|GO:0006139(InterPro)|GO:0008408(InterPro) | |
| Hean16g00799 | 905 | PANTHER | POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED | 60 | 898 | IPR045092 | GO:0000175(PANTHER)|GO:0000175(InterPro)|GO:0000176(PANTHER)|GO:0000467(PANTHER)|GO:0000467(InterPro)|GO:0003727(PANTHER)|GO:0005730(PANTHER)|GO:0071035(PANTHER)|GO:0071036(PANTHER)|GO:0071037(PANTHER)|GO:0071038(PANTHER)|GO:0071039(PANTHER)|GO:0071040(PANTHER)|GO:0071044(PANTHER)|GO:0071051(PANTHER) | |
| Hean16g00799 | 905 | SUPERFAMILY | HRDC-like | 368 | 420 | IPR010997 | GO:0000166(InterPro)|GO:0044237(InterPro) | |
| Hean16g00799 | 905 | CDD | Rrp6p-like-exo | 134 | 328 | IPR049559 | - | |
| Hean16g00799 | 905 | Gene3D | HRDC domain | 359 | 465 | IPR044876 | - | |
| Hean16g00799 | 905 | Gene3D | - | 52 | 344 | IPR036397 | GO:0003676(InterPro) | |
| Hean16g00799 | 905 | MobiDBLite | consensus disorder prediction | 797 | 814 | - | - | |
| Hean16g00799 | 905 | MobiDBLite | consensus disorder prediction | 776 | 795 | - | - | |
| Hean16g00799 | 905 | Pfam | HRDC domain | 372 | 415 | IPR002121 | GO:0003676(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean16g00799 | K12951 | cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr16:22519083 | Hean7g02100 | Hean-Chr7:123771412 | dispersed |