AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g00806 ATGAGTCAAATTAGCAGAAAAATGAGGAGATTAAACCTCAAGAAAACGATCATCTGGCGGGTATCTCTTCTCCGGCGATGTGCTCGATCTTTATGGCACCAAATTCTCGTATGTTGGATCGGTAAATCAATCCGGTACCGGCAACTGTTGAATTCCGGTTCCGGTCCTCTGATTCCGACGTGTCACCGGCGTTCTGTTCCGGTGGAGATAACAACGGTTGATATGGCCACCGTGTGCCAACAGCTTCCGTCGAGAGAAATGTCGGCATGTGGCGGTGATGGGTTTGCTTCCGGTGATGCCACGTCATCCTCCGGCGATGATCAAGGTGCTTCTGATTTGGTTGCTTTGAAGATTTGTGTGTTGGGTGATGAACAAATTGGAAAAACAAGCTTCTTGGCAAAATATGTTGGTAAAGAAAAGAATCAGGAAGAATTAGAAGCTAAAAGAATAAATCATATGGATAAAACACTACGGATTGGAGAAGCTAGAATTTCTTACAACATCTGGGAAGCTGGTGGAGACGCGTTATACCTAGAATATAATTCCTGCAGCTTGCAAGGACTCTGTATAGCTATATTCTTCATGTTTGACCTAACAAGTCGTCGTACGCTCTATAGTGTTATTAATTGGCATCAGCAAGCTAGGAACTACAACCAGACAGCAATGTTAGTGATGGTTGGAAGCAAGTTTGATGAATTTGTCCAGCTTCCCTTGGATTTACAATGGACTATCGCAAGCGAGGCGAGAGCATATGCGAAGGCCTTAAACGCGACCTTGTTCTTCTCAAGTGCATCTTACAATATCAATGTTAATAAAATTTTCAAGTTTGTGACCGCAAAGCTATTTGACATTCCATGGACTCTCAAACGTAATCTTACAGTTGGTGAGCCTATTATCGATTTCTAG 906 43.05 MSQISRKMRRLNLKKTIIWRVSLLRRCARSLWHQILVCWIGKSIRYRQLLNSGSGPLIPTCHRRSVPVEITTVDMATVCQQLPSREMSACGGDGFASGDATSSSGDDQGASDLVALKICVLGDEQIGKTSFLAKYVGKEKNQEELEAKRINHMDKTLRIGEARISYNIWEAGGDALYLEYNSCSLQGLCIAIFFMFDLTSRRTLYSVINWHQQARNYNQTAMLVMVGSKFDEFVQLPLDLQWTIASEARAYAKALNATLFFSSASYNINVNKIFKFVTAKLFDIPWTLKRNLTVGEPIIDF 301
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g00806 301 PANTHER - 114 300 - GO:0003924(PANTHER)|GO:0005525(PANTHER)
Hean16g00806 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 292 IPR027417 -
Hean16g00806 301 Gene3D - 106 291 IPR027417 -
Hean16g00806 301 ProSiteProfiles small GTPase Rab1 family profile. 110 301 - -
Hean16g00806 301 SMART rab-sub-5 116 284 - -
Hean16g00806 301 PRINTS Transforming protein P21 ras signature 157 179 - -
Hean16g00806 301 PRINTS Transforming protein P21 ras signature 259 281 - -
Hean16g00806 301 PRINTS Transforming protein P21 ras signature 219 232 - -
Hean16g00806 301 PRINTS Transforming protein P21 ras signature 116 137 - -
Hean16g00806 301 Pfam Ras family 117 280 IPR001806 GO:0003924(InterPro)|GO:0005525(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g00806 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
404063 Hean16g00806 Hean4g04469
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr16:22836515 Hean8g02941 Hean-Chr8:108200484 dispersed
Hean Hean-Chr16:22836515 Hean4g04469 Hean-Chr4:206103656 wgd