Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean16g00826 | ATGGGGTCCGCTTGTTGTGTTGCTGCTAGAGATAGAACTATAACGGATCGATCTAGTAATGATATTGTTACAAGAAATGATCGGTATTCGCCATCATGGAGCTTTAGGTGGGATAACCGGGGGCGTGTTGCAGGTGAAGAGTCGTCCGTTAACGACAGGTTGGACAATAAATCTCATACAACTGTAGAAACCGCTTATGCAACAGAAGGTAGTCCGTTGGACAGTTCTAGAAGTCTGAGGTGGCAAAAGTCACCACCTTCTGAAGAAATTGGGCTTCCCCAGTTAGATATGTTGCATTCCAAGAATCTTCATGAGATGAAAGATTCAAGGGGAACGCAAACTCCAGTAGCTTTGGAGCTATCTCCAACCAACATGCTAACCCCGACACATTCAATTTCATCCTTGTCAGCATCTCCTTTATCTTCTTCCCAAAGTCAACTCATGCCGATGTCGAGTTTGACTCCGTCAAGATGGGCCCGCCGTTCGCCAGGTCACCACCATCTACTCCGTCAAATATCCGATAGCCGAATTCGAGGCATGATGTCACCAAACTTTTCAATATCTGAAGATGGTTCAGGTTCTCCTTTCATGCACCATCCCGGGTTGACCAATAAGTCAAACGTCGGGTCCCACGGTGGGTCGTCAGACGGTTGGTCAAATAGAGATAGATGGTCTTTTGACAGTGATAGAGTTAGCCGTTCTAGTGTCAGGGTTTCATCCTCTCCGACGGTTGAGATCATGACATGTGCCATCTGCTCCAAGCTGTTGACCGAACGGTCATCTTGGAGCAGCCATAAACTCATGGCTACTAACGGGCTTCCGGTTGTTTCGGTTCTGATATGCGGGCACGTTTATCACGCAGAGTGTTTGGAAAATATGACGTCCGAGATCAATAAGTATGACCCAGCATGTCCAGTTTGTACTTTGGGAGAAAAAAAGGTTATTAAGTTGTCGGGTGAAATGGATTTCAAGGGTAAAATCGGAAAGAAGTTAAGTCGTCGGGTGGTGGATGGTGGTAATTCGGTTATTTTTAATCAGTTTGCAAATGGAAGGGGTCCCGTGATGGGGTCAAGTTCCAGCATGAAAAGCTCGACAAGTACGGGAAAACCGTTTTTAAGGAGACATTTTTCGTTTGGCTACAAACCGAATAGATCTTTTTCTGACAACGGTTTTAGAAAAAAGAGATTTTTCTGGTCGAAATCAAGCAAGGAGTGA | 1215 | 45.35 | MGSACCVAARDRTITDRSSNDIVTRNDRYSPSWSFRWDNRGRVAGEESSVNDRLDNKSHTTVETAYATEGSPLDSSRSLRWQKSPPSEEIGLPQLDMLHSKNLHEMKDSRGTQTPVALELSPTNMLTPTHSISSLSASPLSSSQSQLMPMSSLTPSRWARRSPGHHHLLRQISDSRIRGMMSPNFSISEDGSGSPFMHHPGLTNKSNVGSHGGSSDGWSNRDRWSFDSDRVSRSSVRVSSSPTVEIMTCAICSKLLTERSSWSSHKLMATNGLPVVSVLICGHVYHAECLENMTSEINKYDPACPVCTLGEKKVIKLSGEMDFKGKIGKKLSRRVVDGGNSVIFNQFANGRGPVMGSSSSMKSSTSTGKPFLRRHFSFGYKPNRSFSDNGFRKKRFFWSKSSKE | 404 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean16g00826 | 404 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 229 | 309 | IPR013083 | - | |
| Hean16g00826 | 404 | PANTHER | EXPRESSED PROTEIN | 1 | 313 | - | - | |
| Hean16g00826 | 404 | SMART | ring-2 | 249 | 307 | IPR001841 | - | |
| Hean16g00826 | 404 | MobiDBLite | consensus disorder prediction | 68 | 90 | - | - | |
| Hean16g00826 | 404 | MobiDBLite | consensus disorder prediction | 129 | 148 | - | - | |
| Hean16g00826 | 404 | MobiDBLite | consensus disorder prediction | 193 | 219 | - | - | |
| Hean16g00826 | 404 | ProSiteProfiles | Zinc finger RING-type profile. | 249 | 308 | IPR001841 | - | |
| Hean16g00826 | 404 | MobiDBLite | consensus disorder prediction | 68 | 83 | - | - | |
| Hean16g00826 | 404 | SUPERFAMILY | RING-U-box | 243 | 308 | - | - | |
| Hean16g00826 | 404 | MobiDBLite | consensus disorder prediction | 199 | 219 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean16g00826 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 100884 | Hean10g02878 | Hean16g00826 | |
| 101579 | Hean12g02272 | Hean16g00826 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr12:70651908 | Hean16g00826 | Hean-Chr16:23759441 | dispersed | |
| Hean | Hean-Chr16:23759441 | Hean8g00317 | Hean-Chr8:5076718 | dispersed | |
| Hean | Hean-Chr10:152128331 | Hean16g00826 | Hean-Chr16:23759441 | wgd |