AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g00897 ATGGCTGAAAACTTGATCCAGAGGCTAGAAGCCGCCGTAACACGGCTGGAATCATTCTCCCGCGGCTCTCTTTCTCAGCCGCAAGCTGCCCCACTCGACGCCGCATCAGCCTCATCGGAACCGTCCATCGTCGCATTTGACGATCTCATCACGCAATACGTCGATAAGGTCACCGATGCGTCCCAGAAGATCGGCGGACAGATTAAGGATATTTCGAATGTTCTTAAACAGGCGTTTTCCGCTCAGAAGGAGCTTCTCGTTAAGATTAAACAAACTCAGAAACCTGATGCTGCAGGAATGGCGGAATTTCTGAGGCCATTAAATGAAAAAATAGGTGAAGCAGTTAAAATGACAGAAGGACCCCGTTCCGATTTCTTCAACCACGTGAGGTCTGTTGCTGAAAGCCTGACCGCTTTAGCATGGATTGCATATACAGGGAAAAATTGCGGAATGAGCATGCCTATTGCACATGTTGAAGAATGTTGGCAGTCAGCTGAGTTTTATAGTAACAAGGTCCTTGTAGAATTCAAAAATAAAGATCCAAGTCACGTAGAATGGGCAAAAGCTCTCAAGGAGCTTTATGTACCAGGGTTACGGGATTATGTAAAGAGTCACTATCCTTTGGGACCCGTATGGAGTGCAACAGGGGCAACTGTATCTGCTCCATCAAAGTCTTCTGGACCAGGTGCTCCTGCTGCTCCAAATCCTCCACCAGCTTCACTCGCCAGCTCATCGTCTTCTTCATCTTCTTCGTCCCGTCCACAACAAGGAATGTCTGCGGTTTTTCAAGAAATTAGTTCAAAGCCTGTTACTGCTGGATTAAAAAAAGTTACAGATGACATGAAGACGAAAAACCGCACAGATAGAGCAGGATTTGTGAGTTCTGGTGAAAAAGAACCGCGCAAGAGTGCGCCAGCAGCAGCTGCTAAAGTTGGTCCTCCAAAATTTGAGCTTGTTATGGGTCGCAAATGGGTCGTTGAGAATCAAATCGGCGTGAAGGATTTGTCTATCGATGATTGTGATCCAAGACAAACAGTTTATATTTTCGGATGCAAAGATTCAGTTCTTCAGATAAAAGGGAAAGTTAACAACATAACTGTTGACAAATGCACAAAAATGGGTGTCCTATTTACGGATGTTGTTGCCGCTTTTGAGATTGTTAATTGCAGCAGTCTTGAGGTGCAATGCCAGGGTGCAGCACCTACCATTTCAATAGACAACACAGCAGGTGTCCAGCTGTACTTGAGCAAAGATTCTCTAGAAGCTTCCATCACAACTTCCAAGGCAAGTGAAGTTAATGTGATGGTACCTCCCAAAGATCCTAATGCTGATATGGCGGAACATCCTATGCCACATCAGTACATTCACACTTACCAGGATGGCCACTTTGTTACAACCCCTGTATCCCACTCTGGAGCGTAA 1422 45.57 MAENLIQRLEAAVTRLESFSRGSLSQPQAAPLDAASASSEPSIVAFDDLITQYVDKVTDASQKIGGQIKDISNVLKQAFSAQKELLVKIKQTQKPDAAGMAEFLRPLNEKIGEAVKMTEGPRSDFFNHVRSVAESLTALAWIAYTGKNCGMSMPIAHVEECWQSAEFYSNKVLVEFKNKDPSHVEWAKALKELYVPGLRDYVKSHYPLGPVWSATGATVSAPSKSSGPGAPAAPNPPPASLASSSSSSSSSSRPQQGMSAVFQEISSKPVTAGLKKVTDDMKTKNRTDRAGFVSSGEKEPRKSAPAAAAKVGPPKFELVMGRKWVVENQIGVKDLSIDDCDPRQTVYIFGCKDSVLQIKGKVNNITVDKCTKMGVLFTDVVAAFEIVNCSSLEVQCQGAAPTISIDNTAGVQLYLSKDSLEASITTSKASEVNVMVPPKDPNADMAEHPMPHQYIHTYQDGHFVTTPVSHSGA 473
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g00897 473 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 313 472 IPR036223 -
Hean16g00897 473 Gene3D - 42 217 IPR036222 -
Hean16g00897 473 FunFam Adenylyl cyclase-associated protein 312 472 - -
Hean16g00897 473 MobiDBLite consensus disorder prediction 239 259 - -
Hean16g00897 473 Pfam CAP, N-terminal domain 46 208 IPR053950 -
Hean16g00897 473 Pfam Adenylate cyclase associated (CAP) C terminal 313 470 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Hean16g00897 473 FunFam Adenylyl cyclase-associated protein 42 217 - -
Hean16g00897 473 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Hean16g00897 473 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 42 237 IPR036222 -
Hean16g00897 473 MobiDBLite consensus disorder prediction 217 259 - -
Hean16g00897 473 MobiDBLite consensus disorder prediction 275 296 - -
Hean16g00897 473 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 3 471 IPR001837 GO:0003779(InterPro)|GO:0003779(PANTHER)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
Hean16g00897 473 Pfam CAP N-terminal conserved motif 3 39 IPR013992 GO:0003779(InterPro)|GO:0007010(InterPro)
Hean16g00897 473 Gene3D - 312 472 IPR016098 -
Hean16g00897 473 ProSiteProfiles C-CAP-cofactor C-like domain profile. 313 450 IPR017901 -
Hean16g00897 473 SMART carp 351 388 IPR006599 -
Hean16g00897 473 SMART carp 389 426 IPR006599 -
Hean16g00897 473 MobiDBLite consensus disorder prediction 273 308 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g00897 K17261 adenylyl cyclase-associated protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
100898 Hean10g02907 Hean16g00897
101587 Hean12g02307 Hean16g00897
404073 Hean16g00897 Hean4g04502
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr12:72472726 Hean16g00897 Hean-Chr16:27673083 dispersed
Hean Hean-Chr13:55113032 Hean16g00897 Hean-Chr16:27673083 transposed
Hean Hean-Chr10:153622450 Hean16g00897 Hean-Chr16:27673083 wgd
Hean Hean-Chr16:27673083 Hean4g04502 Hean-Chr4:206615158 wgd