AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g00909 ATGGTGTTAGATATTCACGCCACTCCTTCTATTCCTCCAAACCCTAGAACTACAGCTCCTGGCAAGGTGCAATATGCAGCAGGTGGTGTAGCAAGGAACATTGCTGAGTGCGTATCGAAACTTGGAACAAAGCCTTACATGATAAGTGCATTAGGATTGGACATGCCAGGGAATTTGCTGCTGGAATACTGGAAGTCTGCAGGATTATCATTAGAAGGCATTCGAATGAGCCATGAGATTGAGACTCCAGTTGTATGCATTGTCTTTGATACCGAAGGAGAACCGTCGGCTGCTGTTGCAAGTGTTGAATCACTTGAACGGTTTCTTACACCCGAGTGGGTCGTACAATTTAAACGCAGTATAGCATCAGCTCCTATCATGATGGTTGATGCGAACTTAAGTCTACCAGCTCTCAAAATGTCTTGTCAGCTGGCAACAGAAGTTGGTACCCCAGTGTGGTTTGAGCCTGTATCTGTCGCAAAGTCGAAAAGAATCGCTTCCGTTGCCAAGTATGTAACGTTTGCTTCACCTAATGAAGACGAGCTAATTTCGATGGCAAATTCTCTATCTAACAAACAAAAACTCCCCACAATTACAAAAAATAACAACACCACAATATCATCTCTATTTCAACAACTAAAACCCGCAATATGGGTTTTACTTGAAACCGGCATCAAAGTGGTTATTCTAACCCTCGGTTCAAAAGGCGTATTATTATGCTCTAAAGGACGGTTCAACTTTAAACATATCGGGCCAAAAAGAAACGACAGGTCACATGAAATAGGCAGAAGGTTATACGATACCATAAGTCAACTCTGCCCATCTGAACGGTTTTTTAGTGCATTAAGGCTTGAAGAAAGGTCTAGTATGAGCCCGTATGTGGTGCATTTTCCAGCTGTCGAATGTGCGTCAGTTGTGAGACTGACGGGTGCTGGTGATTGTTTGGTTGGTGGAGCGGTTGCTTCGATTTGTGCGGGTTTAGATGTTATGCAAAGTGTTGCGGTTGGAATTGCGGCTGCTAAAGGTGCTGTTGAGGTGGAGACAAATGTACCTAATGGTTATAATTTGGATCAAATTGCAGCCGATGCACGATCAGCGTACTTGGGTGCCAAGGTTGTTTTTTGTGAATCGACACTGTGA 1140 43.68 MVLDIHATPSIPPNPRTTAPGKVQYAAGGVARNIAECVSKLGTKPYMISALGLDMPGNLLLEYWKSAGLSLEGIRMSHEIETPVVCIVFDTEGEPSAAVASVESLERFLTPEWVVQFKRSIASAPIMMVDANLSLPALKMSCQLATEVGTPVWFEPVSVAKSKRIASVAKYVTFASPNEDELISMANSLSNKQKLPTITKNNNTTISSLFQQLKPAIWVLLETGIKVVILTLGSKGVLLCSKGRFNFKHIGPKRNDRSHEIGRRLYDTISQLCPSERFFSALRLEERSSMSPYVVHFPAVECASVVRLTGAGDCLVGGAVASICAGLDVMQSVAVGIAAAKGAVEVETNVPNGYNLDQIAADARSAYLGAKVVFCESTL 379
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g00909 379 PANTHER ZGC:136858 13 360 - -
Hean16g00909 379 PRINTS Ribokinase signature 167 182 IPR002139 GO:0016301(InterPro)
Hean16g00909 379 PRINTS Ribokinase signature 23 42 IPR002139 GO:0016301(InterPro)
Hean16g00909 379 PRINTS Ribokinase signature 228 239 IPR002139 GO:0016301(InterPro)
Hean16g00909 379 SUPERFAMILY Ribokinase-like 2 348 IPR029056 -
Hean16g00909 379 CDD YeiC-kinase-like 3 345 - -
Hean16g00909 379 Gene3D - 1 370 IPR029056 -
Hean16g00909 379 Pfam pfkB family carbohydrate kinase 14 245 IPR011611 -
Hean16g00909 379 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 28 52 IPR002173 GO:0016301(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g00909 - -