Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean16g00913 | ATGTTTACTAGTTTCGTACCTTTTCGAGGCATGAAATCAAAAATCGTTCCTTACTATATGAACGGAAATCCATCGAGCCTTTTTTGTATATTACCAAGAGACGATTCTTCGCGGTTTTACCCTCCTGGAACTGCACCTGTTTACCTTAACGTGTACGACATTTCCACCATCAACGGTTGTATATCTTGGACCGGCCTCGGTGCATTTCACACCGGTTTAGAAGTTCATGGTGTGGAGTACGGTTTCGGATGTCATCAAGAATCAGAAAGCGGTGTTTTTGAAATCGAGCCTCGAAAGTGCCCCGGGTTCAAGTTTAGGGAGTCGATTTTTATGGGCACGACGAAATTAACCCCGAGTCAAGTTCAAAGATTCATTGAGTTACAATCTAATAACTACTATGGTGACACATATCATCTATTCGGGAAGAATTGCAACCATTTTTGTGAAGATATGTGTTACCAGTTAACAGGGAACAAAATCCCCAAATGGGTCAATCGGCTAGCCCGAATAGGTTCGTGTTGTCGTTGCATTCTTCCAAAGGCTATCAAGGGTTCTTCTGCTGTTAGAGATGAATCAAACTCTCAAGAGAATGAAAAGAGGAGTTTAACAAGTTCGTTTAGTTGTTTCACATCGTTTTCGACGCATAATAAGTTGAGGAAAGTGTCAATATCCTCATTGTATAAACATTCACTCTACAAAGGATGTTTACCTCCATGGGAATTGCAAGTAGACTCACAAAGAGTTAGTGACAATGAGTAA | 759 | 40.71 | MFTSFVPFRGMKSKIVPYYMNGNPSSLFCILPRDDSSRFYPPGTAPVYLNVYDISTINGCISWTGLGAFHTGLEVHGVEYGFGCHQESESGVFEIEPRKCPGFKFRESIFMGTTKLTPSQVQRFIELQSNNYYGDTYHLFGKNCNHFCEDMCYQLTGNKIPKWVNRLARIGSCCRCILPKAIKGSSAVRDESNSQENEKRSLTSSFSCFTSFSTHNKLRKVSISSLYKHSLYKGCLPPWELQVDSQRVSDNE | 252 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean16g00913 | 252 | Gene3D | PPPDE domains | 41 | 200 | IPR042266 | - | |
| Hean16g00913 | 252 | ProSiteProfiles | PPPDE domain profile. | 45 | 182 | IPR008580 | GO:0008233(InterPro) | |
| Hean16g00913 | 252 | PANTHER | DESUMOYLATING ISOPEPTIDASE | 44 | 204 | IPR008580 | GO:0008233(InterPro)|GO:0016579(PANTHER)|GO:0070646(PANTHER)|GO:0101005(PANTHER) | |
| Hean16g00913 | 252 | Pfam | PPPDE putative peptidase domain | 46 | 180 | IPR008580 | GO:0008233(InterPro) | |
| Hean16g00913 | 252 | SMART | DUF862-2a | 45 | 183 | IPR008580 | GO:0008233(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean16g00913 | K22763 | deubiquitinase DESI2 [EC:3.4.19.12] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 404077 | Hean16g00913 | Hean4g04495 | |
| 404078 | Hean16g00913 | Hean4g04517 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr16:28554121 | Hean9g03808 | Hean-Chr9:169965657 | dispersed | |
| Hean | Hean-Chr16:28554121 | Hean4g04517 | Hean-Chr4:206785483 | wgd |