AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g00922 ATGAAATACAATGACATCTCCCATTTTAGCCACCCTCAACACCGGCTCAAACCGGCCTACACCGAGGTCCCATTCAAGTGCGACGGTTGCAAGGAAGTCGGCATAGGGTCCAACTACAAATGCACAACATGCAACTATGATTTACATGTCCATTGTGCCCTCCCATCCCCTTCCATCACCCACCCTTTCTACACCAAGTGTTCATTCCAGTTTCTATCACGCCCTCCTGGCCCCATAGCGCGATACTGCAACGCATGCGAGAAAGCAGTGTCAGGGTTCGTTTACCATTGTAAGTTGTGCGGGTTCGATCTTCACCCTTGTTGTGCCAAGCTTCCAACTATGTTGGATGATGGTGAGGTGGAGTTGTACTTGTATAGAAAAGTGGGGTCCGCCTGCCACAGGTGTGGCAGGAAAGGACGAAGTTGGAGTTACAGGTCAAAGTGCAAGAAGTACAACCTACATGTGGCATGTGTGAAAGAGATGTTGGTGGAGAGTTGGCATGAGATATATTTTGGTAGGGGTGGGGTGAGTGGTGATTTGTGTGGGAAAAATGGGAAACTTGAGACAAGAATTCCAAGCTTGAAGGGTACATTGGAAAGCTATCACCATAATCATCATCATCAAAGCAAAGGCAAAGTGAAGAAGTGTTGTGAGATGGCTGGTTTGGCAATGCAGTTTGTGATTTCAGCTGTTCTTGGTGATCCGACCACTCTAATCGCAGGTGTCGTTGGTTCTTTGATGTCAAGATAG 750 47.47 MKYNDISHFSHPQHRLKPAYTEVPFKCDGCKEVGIGSNYKCTTCNYDLHVHCALPSPSITHPFYTKCSFQFLSRPPGPIARYCNACEKAVSGFVYHCKLCGFDLHPCCAKLPTMLDDGEVELYLYRKVGSACHRCGRKGRSWSYRSKCKKYNLHVACVKEMLVESWHEIYFGRGGVSGDLCGKNGKLETRIPSLKGTLESYHHNHHHQSKGKVKKCCEMAGLAMQFVISAVLGDPTTLIAGVVGSLMSR 249
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g00922 249 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 13 67 IPR002219 -
Hean16g00922 249 SUPERFAMILY Cysteine-rich domain 30 114 IPR046349 -
Hean16g00922 249 Gene3D - 12 58 - -
Hean16g00922 249 Pfam C1 domain 74 109 IPR004146 -
Hean16g00922 249 Pfam C1 domain 9 53 IPR004146 -
Hean16g00922 249 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 247 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g00922 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr16:28934746 Hean12g00533 Hean-Chr12:10524473 dispersed
Hean Hean-Chr16:28934746 Hean12g00543 Hean-Chr12:10643799 transposed