AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean16g00946 | ATGATCATGTGGGCCATGGGTATTCTATCCAAAGCAAGCCTGCTCTTGTTGTGCATTTGGTTTCTTCTCTTATCGACCGCGTATTCGGGTCCTAATGACCGATTAGTAAGAGTTGGACTTAAGAAGAGGAAAATTGACAAACTGAATCAACTTGGACATGCTGGATCTAACGAAGGCGGTGCTAGAAGAAATCATGGTTTTCACGGTAATTTTGGGAGTTCTGATGGTGATGCTATTGCTTTAAGTAATTACATGGATGCTCAGTATTATGGTGAGATTGGTATTGGTACTCCACCTCAAAAGTTCACTGTTGTTTTTGACACGGGTAGTTCTAATCTTTGGGTGCCTTCCGCAAAGTGCTATTTCTCGGTAGCTTGCCTTCTTCACTCAAAGTATAAGTCTAGCCAGTCAAGTTCTTATAAGAAAAATGGGAAATCTGCTGCAATTCAATATGGAACCGGCTCCATCTCCGGTTTCTTTAGCCAAGACGTTATCAAGCTTGGCGATCTTCTTGTGAAAGAGCAAGATTTTATAGAGGCAACCAAAGAGCCCGGTATCACTTTCTTAGCAGCCAAGTTCGACGGTATACTTGGCCTCGGGTTTCAAGAAATCTCCGTTGGGGGTGCCGTTCCTGTTTGGTACAACATGGTGAAACAAGGCCTTGTTGACGAACCTGTGTTTTCGTTTTGGCTTAATCGCAATGTCCATGGCGATGAAGGGGGTGAACTTGTGTTTGGTGGGGTTGACACTAATCATTTCAAGGGTAAACACACATATGTCCCTGTAACTCAGAAAGGCTATTGGCAGTTTGAAATGGGTGATGTCCTGATTGATGATAACCCAACCGGATTTTGCGCCAAGGGCTGTGCAGCAATTGCTGATTCCGGAACCTCTTTGTTGGCTGGTCCAACGGCTGTTATTACTAAAATCAATCAAGCGATTGGTGCTGCGGGTATTATGAGCCAGCAATGCAAGTCATTTATCAACCAGCATGGAAAAACTATAATTGATATGCTACTTTCTGAGACACGACCTGAAAAAATCTGCTCGCAAATGAAGTTATGCGCGTTTGATGGTTCACATGATACAAGCATGATAATTGAGAGTGTGGTCGACAAGAATAATAGAAAATCATCTCGTGTACATGATGAGATATGTAGTCTCTGCGAGACGACTGTTGTTTGGGTGGAAAACAAACTAAAGCGAAATGAAACCGAAGAAGAAATTATTAATCATGCTGATCAGCTGTGTGAACGGCTGCTGAGTCCAATGGGACAATCTGCAGTCGATTGCAACAGTCTTTCATCGATGCCCCATGTCGCTTTTACCATTGGTTGTAAAACTTTTAACCTTTCCCCTCAAGAGTATATCCTGAAAATTGGTGAGGGAGCAAAAGCACAATGCATAAGTGGATTTACTGCTCTTGATGTGGCTCCTCCTCGTGGGCCTCTATGGATCTTGGGAGATATTTTTATGGGTAAATACCATACAGTGTTCGACTATGGTAAATCACGAGTCGGATTTGCAGAAGCAGTTTAA | 1539 | 42.88 | MIMWAMGILSKASLLLLCIWFLLLSTAYSGPNDRLVRVGLKKRKIDKLNQLGHAGSNEGGARRNHGFHGNFGSSDGDAIALSNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSAKCYFSVACLLHSKYKSSQSSSYKKNGKSAAIQYGTGSISGFFSQDVIKLGDLLVKEQDFIEATKEPGITFLAAKFDGILGLGFQEISVGGAVPVWYNMVKQGLVDEPVFSFWLNRNVHGDEGGELVFGGVDTNHFKGKHTYVPVTQKGYWQFEMGDVLIDDNPTGFCAKGCAAIADSGTSLLAGPTAVITKINQAIGAAGIMSQQCKSFINQHGKTIIDMLLSETRPEKICSQMKLCAFDGSHDTSMIIESVVDKNNRKSSRVHDEICSLCETTVVWVENKLKRNETEEEIINHADQLCERLLSPMGQSAVDCNSLSSMPHVAFTIGCKTFNLSPQEYILKIGEGAKAQCISGFTALDVAPPRGPLWILGDIFMGKYHTVFDYGKSRVGFAEAV | 512 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean16g00946 | 512 | Gene3D | - | 319 | 421 | - | - | |
| Hean16g00946 | 512 | ProSiteProfiles | Peptidase family A1 domain profile. | 89 | 509 | IPR033121 | - | |
| Hean16g00946 | 512 | ProSiteProfiles | Saposin B type domain profile. | 319 | 359 | IPR008139 | - | |
| Hean16g00946 | 512 | PANTHER | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED | 25 | 511 | IPR001461 | GO:0004190(PANTHER)|GO:0004190(InterPro)|GO:0006508(InterPro)|GO:0006508(PANTHER) | |
| Hean16g00946 | 512 | FunFam | Lysosomal aspartic protease | 75 | 317 | - | - | |
| Hean16g00946 | 512 | Pfam | Eukaryotic aspartyl protease | 88 | 511 | IPR033121 | - | |
| Hean16g00946 | 512 | FunFam | Vacuolar aspartic proteinase | 401 | 511 | - | - | |
| Hean16g00946 | 512 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 291 | 302 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean16g00946 | 512 | Gene3D | Acid Proteases | 248 | 511 | IPR021109 | - | |
| Hean16g00946 | 512 | SUPERFAMILY | Saposin | 320 | 420 | IPR011001 | - | |
| Hean16g00946 | 512 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 104 | 115 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean16g00946 | 512 | SUPERFAMILY | Acid proteases | 15 | 511 | IPR021109 | - | |
| Hean16g00946 | 512 | ProSiteProfiles | Saposin B type domain profile. | 382 | 423 | IPR008139 | - | |
| Hean16g00946 | 512 | Pfam | Saposin-like type B, region 1 | 385 | 420 | IPR007856 | GO:0006629(InterPro) | |
| Hean16g00946 | 512 | Pfam | Saposin-like type B, region 2 | 322 | 355 | IPR008138 | - | |
| Hean16g00946 | 512 | CDD | phytepsin | 79 | 510 | IPR033869 | GO:0004190(InterPro) | |
| Hean16g00946 | 512 | Gene3D | Acid Proteases | 36 | 247 | IPR021109 | - | |
| Hean16g00946 | 512 | PRINTS | Pepsin (A1) aspartic protease family signature | 291 | 302 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean16g00946 | 512 | PRINTS | Pepsin (A1) aspartic protease family signature | 485 | 500 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean16g00946 | 512 | PRINTS | Pepsin (A1) aspartic protease family signature | 95 | 115 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean16g00946 | 512 | PRINTS | Pepsin (A1) aspartic protease family signature | 241 | 254 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean16g00946 | K08245 | phytepsin [EC:3.4.23.40] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 404082 | Hean16g00946 | Hean4g04408 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr16:29773786 | Hean3g01780 | Hean-Chr3:104601397 | dispersed | |
| Hean | Hean-Chr9:145350937 | Hean16g00946 | Hean-Chr16:29773786 | dispersed | |
| Hean | Hean-Chr17:17948393 | Hean16g00946 | Hean-Chr16:29773786 | transposed | |
| Hean | Hean-Chr16:29773786 | Hean4g04408 | Hean-Chr4:205185244 | wgd |