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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g00962 ATGTCATTAAACAGAGATAGATCGTGTAATCCAACAGTGGTGAAGGTCGGAATAATATTATTGGGTGTGTGTCTGGTGGGTTATTTGGTGGGCCCACCTTTATACTGGCATGTTCTTGAAGGTTTAGCCGCCGTCCGCCGGTCCTCCGCCGCCGTCTCCTGCCCTACATGCAACTGCGACTGTGATTCTCAGCCCCTTCTTTCCATTCCTCAAGCTGTAAGCAATGGTTCTTTCACAGACTGTGCAAAGCATGATCCTGAAGTGAACGGAGAAACCGAAAAGAATTTCGCAGACCTTTTATCAGAGGAACTAAGGTTACGCGAAGCTGAAGCATTAGAAAGCCAACAACGTGCTGACATGGCACTTCTCGAGGCGAAGAAGCTGACATCACAATATCAAAAAGAAGCCGACAAGTGTAACTCCGGAATGGAAACTTGTGAAGAAGCCCGTGAAAAAGCCGAAGCAGCTTTGATTGCGCAAAAACGTCAGAGTGAATTGTGGCAGTCGAGAGCCCGGCAAAGAGGGTGGAAGGAAAACAGTTCTAAAGCGGTAAAGACCGCGTGA 564 48.05 MSLNRDRSCNPTVVKVGIILLGVCLVGYLVGPPLYWHVLEGLAAVRRSSAAVSCPTCNCDCDSQPLLSIPQAVSNGSFTDCAKHDPEVNGETEKNFADLLSEELRLREAEALESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALIAQKRQSELWQSRARQRGWKENSSKAVKTA 187
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g00962 187 Coils Coil 106 126 - -
Hean16g00962 187 PANTHER EXPRESSED PROTEIN 8 182 - -
Hean16g00962 187 Pfam Protein of unknown function (DUF1068) 12 179 IPR010471 -
Hean16g00962 187 MobiDBLite consensus disorder prediction 164 187 - -
Hean16g00962 187 Coils Coil 143 163 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g00962 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
404084 Hean16g00962 Hean4g04397
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr16:30767869 Hean3g01764 Hean-Chr3:103038644 dispersed
Hean Hean-Chr16:30767869 Hean4g04397 Hean-Chr4:204935121 wgd