AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g00965 ATGACGGCGAAGAAGAGATTTGTAAATGTTGCTTCGAGACGCCATATATCGCCGTTAGTTTTGAAGTTTTTGATCTTATTGTTGATATTATTTTGTATCGTTGTTTTTTCCGGAGTATTCTCGCAATTTAGGCTTCAATCGTCGTCTAGTTTCACGGATTTAGGTCTCGATGAATTGCGTCTCGATAGTTATCGTATGAAGATCGCTTTTCTTTTCCTTGTTCGTGATAATCTTCCTCTCGATTTCCTCTGGCACAACTTCTTTAAGAATGCAGATCCTGAGAAATTCACAATTTACGTACACTCGAAGCCTGGTTTTGTGTTCGATGCGTCAACTACCAAATCAGTGTTTTTCTACAACCGACAGTTGAAAAACAGTGTTGAGGTGGGTTGGGGTAAGCCAACTATGATTCAAGCAGAAAAGCTGTTGTTCAAGGCAGCCCTTGATGATCCTGATAATCATATATTTGTTCTTCTCTCTGACAGTTGTGTCCCGCTATATAATTTCAGTTACATATACACATATTTAATGTCATCTCCAAGAAGTTTCGTGGACAGCTTTATTGATGCTACGGAAGAACGTTATAATCCAGAGATGTCTCCTGACATACCTGAAGAAAAATGGCGGAAAGGATCCCAGTGGATCACATTAGTAAGAAGGCACGCAGAGGTGGTTGCATATGATCACGTTGTTTTCCCTGTATTTAACAAACACTGCAAGCGGCGGCCACTTCTAGACTTGAGCAAGGGAAACGAGTCTCTTATAGAGCAGCAGCAACACAATTGCATCCCGGATGAACATTATGTCCCCACCTCACTTGCAATGCAGGGATTTGAGGATGAATTGGCGAGAAGAACATTGACTTATTCTTTATGGAACCAGTCTACCGAAACAATGGATACACAAGCCTGGCACCCTGTAACATTTAGTTATGCAACCGCTAGCCAGAAAAACATTCAAGATATCAAGGATATTGACCATGTTTATTTCAAGTCTGAGAACCGGACTGAATGGTGCAGTGGACCATGTTATCTATTTGCAAGGAAGTTCACTCGTGGTGCATCCATGCGCCTTTTGACGAACGGTGTCGTGGGTCCATATGATCCCAACACATTGTTTTTGGACCGGATATAG 1134 41.71 MTAKKRFVNVASRRHISPLVLKFLILLLILFCIVVFSGVFSQFRLQSSSSFTDLGLDELRLDSYRMKIAFLFLVRDNLPLDFLWHNFFKNADPEKFTIYVHSKPGFVFDASTTKSVFFYNRQLKNSVEVGWGKPTMIQAEKLLFKAALDDPDNHIFVLLSDSCVPLYNFSYIYTYLMSSPRSFVDSFIDATEERYNPEMSPDIPEEKWRKGSQWITLVRRHAEVVAYDHVVFPVFNKHCKRRPLLDLSKGNESLIEQQQHNCIPDEHYVPTSLAMQGFEDELARRTLTYSLWNQSTETMDTQAWHPVTFSYATASQKNIQDIKDIDHVYFKSENRTEWCSGPCYLFARKFTRGASMRLLTNGVVGPYDPNTLFLDRI 377
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g00965 377 PANTHER CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 39 359 IPR044174 GO:0016757(InterPro)
Hean16g00965 377 Pfam Core-2-I-Branching enzyme 68 322 IPR003406 GO:0016020(InterPro)|GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g00965 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr16:30814655 Hean5g00041 Hean-Chr5:1181287 dispersed
Hean Hean-Chr16:30814655 Hean15g01282 Hean-Chr15:30385439 transposed