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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g00967 ATGGAGGAGGTGATCACCATCGCCGACGCGGCGTACCACGCTACCACGGCGGCAGTGACACCGTCGTCTTCGGCTCCGGTGCTTCCGTACAGTGTGCCGCTGTTGTCAGCGTTCCTTGCGTTTGCGATTGCTCAATTCCTCAAGGTTATTACTACCTGGTATAAGGAAAAGAAATGGGATCCTAAAAAGATTGTGGGCTCAGGTGGAATGCCTTCATCTCATTCTTCAACTGTTGTGGCACTTGCAGTATCCATTGGTCTACATGATGGCGTTGAATCATCATCATTTGCAATTGCTGTTGTTATGGCTTTTATCGTTATGTATGATGCATCTGGAGTCAGACTCCATGCCGGTCGCCAGGCTGAAGTGTTAAACCAGATCGTCTGTGAATTTCCTCCGGAGCACCCGTTATCCACATCCAGACCTCTACGTGATTCTCTTGGGCATACTCCATTACAGGTGATTGCAGGGGCCATGTTAGGAATCATAGTGGCACTTATGATGAAAGCATCTGAGTAG 519 48.94 MEEVITIADAAYHATTAAVTPSSSAPVLPYSVPLLSAFLAFAIAQFLKVITTWYKEKKWDPKKIVGSGGMPSSHSSTVVALAVSIGLHDGVESSSFAIAVVMAFIVMYDASGVRLHAGRQAEVLNQIVCEFPPEHPLSTSRPLRDSLGHTPLQVIAGAMLGIIVALMMKASE 172
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g00967 172 Pfam Divergent PAP2 family 33 164 IPR003832 -
Hean16g00967 172 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 13 170 IPR003832 -
Hean16g00967 172 CDD PAP2-like 34 166 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g00967 K09775 uncharacterized protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr12:160042959 Hean16g00967 Hean-Chr16:30849003 dispersed
Hean Hean-Chr16:30849003 Hean17g04349 Hean-Chr17:188824063 dispersed
Hean Hean-Chr16:30849003 Hean8g02906 Hean-Chr8:107130324 transposed