AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g01001 ATGCGTTCATCCATGACAATTACAAGCCCTAACTTCCCATCTTTACCCCAATTTCACCAACCAAACACCCACAAACCACCACCAACGATAACCACCCTTCAAAACCCCAGAAAAACCCATCAAAAATGTTTAAAGAATTCAGGGTTTTTGTCTGCAATTGGGAACGCAATAGAAGAACAAGAGTATAGGAAAGCTAGGGCTGAAGTTGTGAGAAAAGGAACAGGGTTAGAGGGGTATAATATTGAGGGTCTTTCTATTGGTGGTAATGAGACTTGTGTTATTGTTCCTGAGTTTAAGTGTGCTTTTGATATTGGAAGGTGTCCACCCAGAGCTGTTGGGATGAATTTCTTGTGTATTACTCATGCCCATCTTGATCACATTGGTGGGCTACCGATGTATGTTGCAAGTCGCGGTTTATACAACATGAGTCCTCCAACCGTATTTGTACCTCCGTCCATTAAAGAAGATGTCGAAAATTTGATTGAGCTTCACAGGAAGATGGGTGACGTGGAATTAAATCTTGATTTGGTTGCGTTGGATGTAGGAGAAACATACGAGCTACGAAACGATCTTGTTGTACGCCCATTTAAAACTTATCACGTAATACCAAGTCAGGGTTATGTGATTTACTCGGTTCGCAAGAAATTGAAAAAGCAGTACATTCACTTAAAAGGAAGGGAGATTGAGAAAAAGAAGAAATCTGGTGTTGAGATAACAGATACCATATTGTCCCCGGAGGTAGCATTCACTGGTGATACGAGTTCTGAGTTTCTACTTGATCCACGAAGCTCCGATGCATTGCGAGCCAAAGTTCTTATAACCGAGGCTACTTTTTTGGATGATCAATGCAACGTTGAGCACGCGCGTGAACATGGTCACATGCATATTGACGAGATTATCGAACATTCTAAGTGGATTAGGAACAAGGCGATTCTTTTGACTCATTTCTCGGCACGCTACCATATCGAGGAAATTCGTCAAGCGGTGACAAAGTTGCAGGCAAAAGTTCAAGGTCAAGCCAAAGTGGTCCCACTTACAGAAGGTTTTAGATCAATGTACACACCATAA 1068 41.85 MRSSMTITSPNFPSLPQFHQPNTHKPPPTITTLQNPRKTHQKCLKNSGFLSAIGNAIEEQEYRKARAEVVRKGTGLEGYNIEGLSIGGNETCVIVPEFKCAFDIGRCPPRAVGMNFLCITHAHLDHIGGLPMYVASRGLYNMSPPTVFVPPSIKEDVENLIELHRKMGDVELNLDLVALDVGETYELRNDLVVRPFKTYHVIPSQGYVIYSVRKKLKKQYIHLKGREIEKKKKSGVEITDTILSPEVAFTGDTSSEFLLDPRSSDALRAKVLITEATFLDDQCNVEHAREHGHMHIDEIIEHSKWIRNKAILLTHFSARYHIEEIRQAVTKLQAKVQGQAKVVPLTEGFRSMYTP 355
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g01001 355 Gene3D - 79 345 IPR036866 -
Hean16g01001 355 MobiDBLite consensus disorder prediction 1 36 - -
Hean16g01001 355 SUPERFAMILY Metallo-hydrolase-oxidoreductase 87 329 IPR036866 -
Hean16g01001 355 PANTHER TRNASE Z TRZ1 11 349 - -
Hean16g01001 355 Pfam Beta-lactamase superfamily domain 113 316 IPR001279 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g01001 K00784 ribonuclease Z [EC:3.1.26.11]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr16:32866812 Hean9g04075 Hean-Chr9:176007549 dispersed