Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean16g01313 | ATGACTTGCTCTATCTCTATGGCTGGTCATGGTACATTACTTGTGGCCATGTTGATAATGGTAGCTTTCGTTGAGTCTGCTACTCCACCGGGGATCGCTAAAAACCCTACCGAAGCAAAATGTGAGGACCCCAACTTCAGACAATGTCACAACTTGGTCCATGTTTGTCCTAAGTTTTGTGATAATGGCTGCTACGTTCATTGTCCCTCCTGCAAACCTGTTTGTAACAACTCCACCATGCAATCACCACCTCCCTACGTTACACCACCAACTCCTCAAACGCCTCCTACGCCTACACCGCCTTCTCCTTCGCCTCCTACGCCTACACCACCTTCCCCTTCGCCCCCTACATGGACCCCTCCTTCTGCCCCTCAAGGAGCGAAAGCCAGGTGCAAAAACCGAAACTATCCACAATGTTATGCCACCGAGCATGCCTGTCCTCCATCTTGTCCTGGAAAATGCGAGGTCGATTGTGTCTCCTGCAAGCCAGTTTGTAGCTGCGATATGCCGGGAGCGGTGTGCCAAGATCCTCGTTTCATTGGTGCTGATGGCATCACTTTCTACTTCCATGGAAAGAAGGATAAAGATTTTTGCCTTGTTACCAACAACAACCTCCACATCAATGGCCACTTCATCGGCAAGAGGAACCAAAACATGGGTAGAGACTTCACCTGGATTCAATCCATTGGGGTTCTCTTCGATAATCACAAACTACAAATCAGTGCTCAAAAGACTTCCACCTGGGATGACTCTATCGACCGTATCTCCATCACATTTGATGGGGAAGACATCCTTCTACCAAAAACCGAAGGCTCCAAATGGCAGTCTTCCTCAACAACTATCACTCGGGTTCAAGACACAAACGATGTCGTTGTTGAAGTTGAAAACATGTTCAAGATCACTGCCAAAGTGATTCCGATTACAAAAGAGGATTCAAGAATCCACAAATATGAAATAACCAATGACGATTGCTTTGCTCATCTTGATCTCAAGTTCAAGTTCTTCTCGTTAGGTGAGGAAGTTGACGGAGTTTTGGGACAGACTTACAAGAGCGACTATGTGAGCAAGGTGAAAATGGGAGTCTTAATGCCTGTTATGGGTGGAGATGACAAGTTTTTGAGTGCAGGATTGTTTGCGACGGATTGTTTAGTTGCTAAGTTTAAGGGTAGAGCCAGCAATGACGAAGGCTCCTCGTTGAACTTGCAATTGCCCAGCGTGAGGTGCCAAAGTGGATTGGATGGTCGAGGCATTGTATGCAAGAGATAG | 1266 | 46.84 | MTCSISMAGHGTLLVAMLIMVAFVESATPPGIAKNPTEAKCEDPNFRQCHNLVHVCPKFCDNGCYVHCPSCKPVCNNSTMQSPPPYVTPPTPQTPPTPTPPSPSPPTPTPPSPSPPTWTPPSAPQGAKARCKNRNYPQCYATEHACPPSCPGKCEVDCVSCKPVCSCDMPGAVCQDPRFIGADGITFYFHGKKDKDFCLVTNNNLHINGHFIGKRNQNMGRDFTWIQSIGVLFDNHKLQISAQKTSTWDDSIDRISITFDGEDILLPKTEGSKWQSSSTTITRVQDTNDVVVEVENMFKITAKVIPITKEDSRIHKYEITNDDCFAHLDLKFKFFSLGEEVDGVLGQTYKSDYVSKVKMGVLMPVMGGDDKFLSAGLFATDCLVAKFKGRASNDEGSSLNLQLPSVRCQSGLDGRGIVCKR | 421 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean16g01313 | 421 | PRINTS | Proline rich extensin signature | 90 | 106 | - | - | |
| Hean16g01313 | 421 | PRINTS | Proline rich extensin signature | 112 | 129 | - | - | |
| Hean16g01313 | 421 | PRINTS | Proline rich extensin signature | 69 | 90 | - | - | |
| Hean16g01313 | 421 | PRINTS | Proline rich extensin signature | 28 | 40 | - | - | |
| Hean16g01313 | 421 | MobiDBLite | consensus disorder prediction | 83 | 122 | - | - | |
| Hean16g01313 | 421 | Pfam | Root cap | 331 | 387 | IPR009646 | - | |
| Hean16g01313 | 421 | PANTHER | ROOT CAP DOMAIN-CONTAINING PROTEIN | 102 | 421 | - | - | |
| Hean16g01313 | 421 | MobiDBLite | consensus disorder prediction | 83 | 126 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean16g01313 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr16:50108380 | Hean16g01318 | Hean-Chr16:50787192 | dispersed | |
| Hean | Hean-Chr16:50065302 | Hean16g01313 | Hean-Chr16:50108380 | proximal |