AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g01313 ATGACTTGCTCTATCTCTATGGCTGGTCATGGTACATTACTTGTGGCCATGTTGATAATGGTAGCTTTCGTTGAGTCTGCTACTCCACCGGGGATCGCTAAAAACCCTACCGAAGCAAAATGTGAGGACCCCAACTTCAGACAATGTCACAACTTGGTCCATGTTTGTCCTAAGTTTTGTGATAATGGCTGCTACGTTCATTGTCCCTCCTGCAAACCTGTTTGTAACAACTCCACCATGCAATCACCACCTCCCTACGTTACACCACCAACTCCTCAAACGCCTCCTACGCCTACACCGCCTTCTCCTTCGCCTCCTACGCCTACACCACCTTCCCCTTCGCCCCCTACATGGACCCCTCCTTCTGCCCCTCAAGGAGCGAAAGCCAGGTGCAAAAACCGAAACTATCCACAATGTTATGCCACCGAGCATGCCTGTCCTCCATCTTGTCCTGGAAAATGCGAGGTCGATTGTGTCTCCTGCAAGCCAGTTTGTAGCTGCGATATGCCGGGAGCGGTGTGCCAAGATCCTCGTTTCATTGGTGCTGATGGCATCACTTTCTACTTCCATGGAAAGAAGGATAAAGATTTTTGCCTTGTTACCAACAACAACCTCCACATCAATGGCCACTTCATCGGCAAGAGGAACCAAAACATGGGTAGAGACTTCACCTGGATTCAATCCATTGGGGTTCTCTTCGATAATCACAAACTACAAATCAGTGCTCAAAAGACTTCCACCTGGGATGACTCTATCGACCGTATCTCCATCACATTTGATGGGGAAGACATCCTTCTACCAAAAACCGAAGGCTCCAAATGGCAGTCTTCCTCAACAACTATCACTCGGGTTCAAGACACAAACGATGTCGTTGTTGAAGTTGAAAACATGTTCAAGATCACTGCCAAAGTGATTCCGATTACAAAAGAGGATTCAAGAATCCACAAATATGAAATAACCAATGACGATTGCTTTGCTCATCTTGATCTCAAGTTCAAGTTCTTCTCGTTAGGTGAGGAAGTTGACGGAGTTTTGGGACAGACTTACAAGAGCGACTATGTGAGCAAGGTGAAAATGGGAGTCTTAATGCCTGTTATGGGTGGAGATGACAAGTTTTTGAGTGCAGGATTGTTTGCGACGGATTGTTTAGTTGCTAAGTTTAAGGGTAGAGCCAGCAATGACGAAGGCTCCTCGTTGAACTTGCAATTGCCCAGCGTGAGGTGCCAAAGTGGATTGGATGGTCGAGGCATTGTATGCAAGAGATAG 1266 46.84 MTCSISMAGHGTLLVAMLIMVAFVESATPPGIAKNPTEAKCEDPNFRQCHNLVHVCPKFCDNGCYVHCPSCKPVCNNSTMQSPPPYVTPPTPQTPPTPTPPSPSPPTPTPPSPSPPTWTPPSAPQGAKARCKNRNYPQCYATEHACPPSCPGKCEVDCVSCKPVCSCDMPGAVCQDPRFIGADGITFYFHGKKDKDFCLVTNNNLHINGHFIGKRNQNMGRDFTWIQSIGVLFDNHKLQISAQKTSTWDDSIDRISITFDGEDILLPKTEGSKWQSSSTTITRVQDTNDVVVEVENMFKITAKVIPITKEDSRIHKYEITNDDCFAHLDLKFKFFSLGEEVDGVLGQTYKSDYVSKVKMGVLMPVMGGDDKFLSAGLFATDCLVAKFKGRASNDEGSSLNLQLPSVRCQSGLDGRGIVCKR 421
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g01313 421 PRINTS Proline rich extensin signature 90 106 - -
Hean16g01313 421 PRINTS Proline rich extensin signature 112 129 - -
Hean16g01313 421 PRINTS Proline rich extensin signature 69 90 - -
Hean16g01313 421 PRINTS Proline rich extensin signature 28 40 - -
Hean16g01313 421 MobiDBLite consensus disorder prediction 83 122 - -
Hean16g01313 421 Pfam Root cap 331 387 IPR009646 -
Hean16g01313 421 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 102 421 - -
Hean16g01313 421 MobiDBLite consensus disorder prediction 83 126 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g01313 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr16:50108380 Hean16g01318 Hean-Chr16:50787192 dispersed
Hean Hean-Chr16:50065302 Hean16g01313 Hean-Chr16:50108380 proximal