AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean16g01324 | ATGACCACTCAGGGCATCCATGGCAATCTCCTTGAAGTCACCGTCGTTAGCTGCAGTAAACTGAAGGATACGGAATGGATTTCAAGGCAAGATCCTTACGTTTCTATCGAATATGGGAGCAGTAAATCCACGACTCGTACTTGTACAGATGGAGGCAAGAATCCAACATTTCAAGAGAAGTTTGTATTTACACTAATTGAAGGATTAAGAGAGCTGAATGTTTCGGTTTGGAATAGCAATACGGTCACACACGATGATTTCATCGGTAGCGGAAAGATTCCATTGACAAAAGCTCTTTCTCAGGGATTTGATGATAGTAGCTGGCCGTTACAAAGTAAAACCGGCAGGCATGCCGGAGAGGTCCGAATAATATTGCATTATACTACTAGCGGATATAAACCACCAAAAGATTCTACTCAGAAACCATCAAAGGGTTTTGCACCATCAGCACCGTCACATGTAGCACCTCCGGCGGCCATGTACGCTGCACCACCACCGGCTTATCATCCACCAGGTGGCGCTTATCCTCCACCCGGTGGTGCTTATCCTCCACCTGCTGATGCTTATCCTCCACCCTACCAACATAATCCAAGTGCTTATCCACCGGCACCATACCCACCACAGCCAGTTACTTATCCTCCTCCGCCCTATCCAGCTTATGGATCACATTATCCCCCAGGTTCTCCTTTTCCCGGAATGTATCCTCCGCCACCTTATTGA | 720 | 47.22 | MTTQGIHGNLLEVTVVSCSKLKDTEWISRQDPYVSIEYGSSKSTTRTCTDGGKNPTFQEKFVFTLIEGLRELNVSVWNSNTVTHDDFIGSGKIPLTKALSQGFDDSSWPLQSKTGRHAGEVRIILHYTTSGYKPPKDSTQKPSKGFAPSAPSHVAPPAAMYAAPPPAYHPPGGAYPPPGGAYPPPADAYPPPYQHNPSAYPPAPYPPQPVTYPPPPYPAYGSHYPPGSPFPGMYPPPPY | 239 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean16g01324 | 239 | MobiDBLite | consensus disorder prediction | 132 | 146 | - | - | |
| Hean16g01324 | 239 | Pfam | C2 domain | 10 | 101 | IPR000008 | - | |
| Hean16g01324 | 239 | CDD | C2 | 11 | 108 | - | - | |
| Hean16g01324 | 239 | Gene3D | C2 domain | 9 | 129 | IPR035892 | - | |
| Hean16g01324 | 239 | MobiDBLite | consensus disorder prediction | 130 | 151 | - | - | |
| Hean16g01324 | 239 | MobiDBLite | consensus disorder prediction | 178 | 206 | - | - | |
| Hean16g01324 | 239 | SMART | C2-3c | 10 | 107 | IPR000008 | - | |
| Hean16g01324 | 239 | SUPERFAMILY | C2 domain (Calcium-lipid-binding domain, CaLB) | 8 | 130 | IPR035892 | - | |
| Hean16g01324 | 239 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Hean16g01324 | 239 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) | 10 | 238 | IPR052981 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean16g01324 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 100767 | Hean10g02387 | Hean16g01324 | |
| 102764 | Hean16g01324 | Hean3g01617 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr10:131405661 | Hean16g01324 | Hean-Chr16:51045126 | dispersed | |
| Hean | Hean-Chr16:51045126 | Hean3g01620 | Hean-Chr3:97191851 | dispersed |